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The map label for this gene is yhiR [H]

Identifier: 218708149

GI number: 218708149

Start: 74703

End: 75560

Strand: Reverse

Name: yhiR [H]

Synonym: VS_0083

Alternate gene names: 218708149

Gene position: 75560-74703 (Counterclockwise)

Preceding gene: 218708151

Following gene: 218708148

Centisome position: 2.29

GC content: 46.97

Gene sequence:

>858_bases
GTGTTACGAGAGTTTAATTTGTTAAGTTATCGCCACAGCTTCCACGCGGGCAACCATGCCGACGTAGTAAAGCATATCGT
ACAGAGCCTTATTCTTAATTCTTTGAAACAAAAGGATAAGCCTTTTGTTTACCATGACACTCACTCTGGTGTAGGTCGTT
ATGACTTAACGCATGAATGGTCTGAAAAAACGGGCGAATACAAGCAAGGTATTGCACGCGTCTGGGCACAAACAGAACTT
CCTGAAGACATTCAAAGCTACCTTGAGTCTATCTCAGCACTCAACAATGGTGAAAAACTGCGTTTCTACCCAGGTTCACC
ACGTGTTGCACGTGCACACCTGCGTGATCAAGACCGCATGGTACTGACCGAACTTCACCCTGCAGACCACCCGCTACTTG
AGCAAGAGTTCCACCGCGATCGTCAGGTGTCTATCTATAAAGAAGATGGCTTCCAACGCTTAAAAGGCAGCCTGCCACCA
AAAGAGCGTCGTGGTTTGGTGCTGATCGACCCACCTTACGAGCTGGCAAAAGAGTATCGTGATGTTGTGACTGCGATAGC
TCAAAGCCATAAACGCTGGGCAACTGGTATCTACGCAATTTGGTACCCAGTGGTAAACCGCTGTGATATCGAAGACATGA
TTGAAGGACTTGAAGGCCTAGGCATTAACAAAATTCTACAAATCGAACTTGGCGTATCACCAGACACCAATGAGCGTGGC
ATGACAGCATCAGGCATGATTGTTATCAACCCGCCTTGGAAGCTAGAAAGCCAAATGAACGAAATTCTTCCATTCTTGAA
GGAAGCAATTGCGCCGGCAACCGGTCACTTCAAAGTAGAGTGGATCGTACCCGAGTAA

Upstream 100 bases:

>100_bases
TGCGAACAGCTGTTCCTGAATTGTTCGAGAATTTATGGTCCATTGGGGGTTATAATAGTCAAATTAACCCCACCTACACT
AACCACACTCTAATTCGAGA

Downstream 100 bases:

>100_bases
TCTCGAACTTAACGTCATGCTCTGACGAATATTCAGCAGATTGTGACGTACACGAATAAATTTTAAACAGGGAGATTGAG
TTCAACCGATCTGCCCTCAA

Product: putative protein involved in catabolism of external DNA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLREFNLLSYRHSFHAGNHADVVKHIVQSLILNSLKQKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARVWAQTEL
PEDIQSYLESISALNNGEKLRFYPGSPRVARAHLRDQDRMVLTELHPADHPLLEQEFHRDRQVSIYKEDGFQRLKGSLPP
KERRGLVLIDPPYELAKEYRDVVTAIAQSHKRWATGIYAIWYPVVNRCDIEDMIEGLEGLGINKILQIELGVSPDTNERG
MTASGMIVINPPWKLESQMNEILPFLKEAIAPATGHFKVEWIVPE

Sequences:

>Translated_285_residues
MLREFNLLSYRHSFHAGNHADVVKHIVQSLILNSLKQKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARVWAQTEL
PEDIQSYLESISALNNGEKLRFYPGSPRVARAHLRDQDRMVLTELHPADHPLLEQEFHRDRQVSIYKEDGFQRLKGSLPP
KERRGLVLIDPPYELAKEYRDVVTAIAQSHKRWATGIYAIWYPVVNRCDIEDMIEGLEGLGINKILQIELGVSPDTNERG
MTASGMIVINPPWKLESQMNEILPFLKEAIAPATGHFKVEWIVPE
>Mature_285_residues
MLREFNLLSYRHSFHAGNHADVVKHIVQSLILNSLKQKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIARVWAQTEL
PEDIQSYLESISALNNGEKLRFYPGSPRVARAHLRDQDRMVLTELHPADHPLLEQEFHRDRQVSIYKEDGFQRLKGSLPP
KERRGLVLIDPPYELAKEYRDVVTAIAQSHKRWATGIYAIWYPVVNRCDIEDMIEGLEGLGINKILQIELGVSPDTNERG
MTASGMIVINPPWKLESQMNEILPFLKEAIAPATGHFKVEWIVPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=61.7857142857143, Blast_Score=370, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32783; Mature: 32783

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREFNLLSYRHSFHAGNHADVVKHIVQSLILNSLKQKDKPFVYHDTHSGVGRYDLTHEW
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHH
SEKTGEYKQGIARVWAQTELPEDIQSYLESISALNNGEKLRFYPGSPRVARAHLRDQDRM
HHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCE
VLTELHPADHPLLEQEFHRDRQVSIYKEDGFQRLKGSLPPKERRGLVLIDPPYELAKEYR
EEEECCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHCCCCCHHHCCEEEECCCHHHHHHHH
DVVTAIAQSHKRWATGIYAIWYPVVNRCDIEDMIEGLEGLGINKILQIELGVSPDTNERG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
MTASGMIVINPPWKLESQMNEILPFLKEAIAPATGHFKVEWIVPE
CEECCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLREFNLLSYRHSFHAGNHADVVKHIVQSLILNSLKQKDKPFVYHDTHSGVGRYDLTHEW
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHH
SEKTGEYKQGIARVWAQTELPEDIQSYLESISALNNGEKLRFYPGSPRVARAHLRDQDRM
HHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCE
VLTELHPADHPLLEQEFHRDRQVSIYKEDGFQRLKGSLPPKERRGLVLIDPPYELAKEYR
EEEECCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHCCCCCHHHCCEEEECCCHHHHHHHH
DVVTAIAQSHKRWATGIYAIWYPVVNRCDIEDMIEGLEGLGINKILQIELGVSPDTNERG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
MTASGMIVINPPWKLESQMNEILPFLKEAIAPATGHFKVEWIVPE
CEECCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]