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The map label for this gene is 218708111

Identifier: 218708111

GI number: 218708111

Start: 22208

End: 23128

Strand: Direct

Name: 218708111

Synonym: VS_0023

Alternate gene names: NA

Gene position: 22208-23128 (Clockwise)

Preceding gene: 218708110

Following gene: 218708112

Centisome position: 0.67

GC content: 41.8

Gene sequence:

>921_bases
ATGTATTGTTTGATTATTTTGGGTGGGGCAATACTCATGATTGTAGCGCTTAAGCCGAATAGAGCTCCTTCTGTTGATGA
GTATTTATCACAGCAAGCGAAAGGTAATCTGAAAAGCGATCTGAGTTTTACGCAACAAGCGGTTAATTTTGCCAGTCTTT
CTGATCGTAACTTCAAACAGAAACTTCGTGTGCGTTGGGATAACTTACAGCGCCAACTTGGAAAAATGGCATTAGGTAAG
GTCGTCATTTTTTCTGTTGTAGCACTGCTTGCGATCGGCATTCTTAATCAAATGTCACTGCGCTTACCTTGGTTTGAAAT
TTTGCCTTTGACTCTCATTATTGCTTGGTTTTTTGGTTATCTCCATTTACAGAAACGAGAGAAAAAACGCTTTGAAGAAA
CCTTCCCTGATGCGTTGAACATGCTGGCAAGTTCCCTTAGTGCGGGTGAAAGCATAGGGCGAGGCATTGGGTATGTAGGG
AAGAAACTTGAAGGTGAGGTAGGTAAAGAGTTTAAGCTGATGAGCGAGCGCCTCAATTTAGGAGAGCCGATTGATGATGT
GTTTCGTAAATCTTGTCGTCGCTTTCCGTATCCGTCGTTTCATTTTTTTGTCATTACCTTGCGAGCTAACATGCAAAGAG
GGGGGCAATTAAAAGAGGTGATGTCACGTCTGAATCGACAAATGTTCGAAGCGAGAGCTGTAGAAAGAAAAAAGTTTGCT
CTTACTTCAGAGGCTCGTATCTCCGCAAAAATTGTAGGAGCAACACCATTCTTCTTTCTGTTTATTTTGCAGTTTCTTAG
TCCTGAAAATTTTGAGTTCGTAATGCACCACCCAGAAGGGAGACCGATTCTTTACTACCTCATCACAAGTGAAAGTATCG
GCATGCTGATCATCTGGGCGTTAATGAAAAAGGTGAAGTAA

Upstream 100 bases:

>100_bases
GGCTCGTTCTGCGCTTTATGAAAAAGCCCGTTTCTTTGGTGTAGAGCAGAAGTTAACTCAAGTGATTGAGTCTATGACAC
TCAATCAATAGGAGTGAGAC

Downstream 100 bases:

>100_bases
TGGCTTCTTCAATAAACTTCTCGAACGTTGGGTTATTTTTCGCCTGGGCCGGCGTAGCATTTGGCTTGTTGCTCATATTT
TATTGGTTAGTCGTGTGTAC

Product: putative bacterial type II secretion system protein F

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Pilus Assembly Protein; Type II Secretion System F Domain Protein; Flp Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; TadB Protein; Pilus Assembly Protein TadB; Tight Adherence Protein B; Type II/IV Secretion System Protein TadC Subfamily; Bacterial Type II Secretion System Protein F; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Type II Secretion System; MaoC Protein; Flp Pilus Assembly Protein Tadb; Type II Secretion System Protein F Domain; Tight Adherance Operon Protein B; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Tad Secretion System Pilus Assembly Protein; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Tight Adherance Operon Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MYCLIILGGAILMIVALKPNRAPSVDEYLSQQAKGNLKSDLSFTQQAVNFASLSDRNFKQKLRVRWDNLQRQLGKMALGK
VVIFSVVALLAIGILNQMSLRLPWFEILPLTLIIAWFFGYLHLQKREKKRFEETFPDALNMLASSLSAGESIGRGIGYVG
KKLEGEVGKEFKLMSERLNLGEPIDDVFRKSCRRFPYPSFHFFVITLRANMQRGGQLKEVMSRLNRQMFEARAVERKKFA
LTSEARISAKIVGATPFFFLFILQFLSPENFEFVMHHPEGRPILYYLITSESIGMLIIWALMKKVK

Sequences:

>Translated_306_residues
MYCLIILGGAILMIVALKPNRAPSVDEYLSQQAKGNLKSDLSFTQQAVNFASLSDRNFKQKLRVRWDNLQRQLGKMALGK
VVIFSVVALLAIGILNQMSLRLPWFEILPLTLIIAWFFGYLHLQKREKKRFEETFPDALNMLASSLSAGESIGRGIGYVG
KKLEGEVGKEFKLMSERLNLGEPIDDVFRKSCRRFPYPSFHFFVITLRANMQRGGQLKEVMSRLNRQMFEARAVERKKFA
LTSEARISAKIVGATPFFFLFILQFLSPENFEFVMHHPEGRPILYYLITSESIGMLIIWALMKKVK
>Mature_306_residues
MYCLIILGGAILMIVALKPNRAPSVDEYLSQQAKGNLKSDLSFTQQAVNFASLSDRNFKQKLRVRWDNLQRQLGKMALGK
VVIFSVVALLAIGILNQMSLRLPWFEILPLTLIIAWFFGYLHLQKREKKRFEETFPDALNMLASSLSAGESIGRGIGYVG
KKLEGEVGKEFKLMSERLNLGEPIDDVFRKSCRRFPYPSFHFFVITLRANMQRGGQLKEVMSRLNRQMFEARAVERKKFA
LTSEARISAKIVGATPFFFLFILQFLSPENFEFVMHHPEGRPILYYLITSESIGMLIIWALMKKVK

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35083; Mature: 35083

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCLIILGGAILMIVALKPNRAPSVDEYLSQQAKGNLKSDLSFTQQAVNFASLSDRNFKQ
CEEEEEEHHHHHEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
KLRVRWDNLQRQLGKMALGKVVIFSVVALLAIGILNQMSLRLPWFEILPLTLIIAWFFGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LHLQKREKKRFEETFPDALNMLASSLSAGESIGRGIGYVGKKLEGEVGKEFKLMSERLNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
GEPIDDVFRKSCRRFPYPSFHFFVITLRANMQRGGQLKEVMSRLNRQMFEARAVERKKFA
CCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LTSEARISAKIVGATPFFFLFILQFLSPENFEFVMHHPEGRPILYYLITSESIGMLIIWA
HCCCCHHEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHH
LMKKVK
HHHHCC
>Mature Secondary Structure
MYCLIILGGAILMIVALKPNRAPSVDEYLSQQAKGNLKSDLSFTQQAVNFASLSDRNFKQ
CEEEEEEHHHHHEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
KLRVRWDNLQRQLGKMALGKVVIFSVVALLAIGILNQMSLRLPWFEILPLTLIIAWFFGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LHLQKREKKRFEETFPDALNMLASSLSAGESIGRGIGYVGKKLEGEVGKEFKLMSERLNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
GEPIDDVFRKSCRRFPYPSFHFFVITLRANMQRGGQLKEVMSRLNRQMFEARAVERKKFA
CCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LTSEARISAKIVGATPFFFLFILQFLSPENFEFVMHHPEGRPILYYLITSESIGMLIIWA
HCCCCHHEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHH
LMKKVK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA