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The map label for this gene is yedN [H]

Identifier: 218705429

GI number: 218705429

Start: 2245129

End: 2245932

Strand: Reverse

Name: yedN [H]

Synonym: ECUMN_2227

Alternate gene names: 218705429

Gene position: 2245932-2245129 (Counterclockwise)

Preceding gene: 218705430

Following gene: 218705428

Centisome position: 43.17

GC content: 35.07

Gene sequence:

>804_bases
ATGTTTCCATTAAATGATCTTTCGTTAAAAACTCAGCCGGTTCAATTAAATAAAGTCACATCTAATACTGAATCTACGAT
AAAACAACACGAGTTAGTATCTGATGATGCAATCATAAATGAATTATCAAGTGAGTTAGTCAGTTGTCTTGGAAATGGTA
AGTTTACACCAATTAGTGAAGACAGCAAATTATTTAATATGCTGTCAGAATTTAAGTTATTGCACTCAGAATATTTCGAA
TGGGGTGATTATAGTCTCTGGTTTCAAGGTTTCTCGATTTATGATAAGACAGGTTTTATCATGATAGAAAAAAGTCAGGG
AGCTGGTAATCCACCCATTCGGCATACATTAGAGTTTATATCGACTAATATTGCAGAGTTTCTAGACAAGTTAACGAAAA
TTACAGATGCCAGACTTTGCAAAGGTTTCAGTGACTGGGCTAATTCAGTCAAAGAAGGCGCATCGAATGACTTCAAAGAA
AATGTGGATATAGCATTGGTGAGATTGTTTAAATGTGTTGAACTCCACAATAGTAAACTTGACTTAACAGATCTTCACTT
GGGGTCTTTGCCACCTCTTCCAGACTGGATTGAGGTGCTTTCTCTTCGTCATAATGGCCTTGCCACAATACAAATTCCCA
AATTCTGCAAAGAATTAGAACTCGATTTTAATAATTATATGGTATTTCCAAAAGTATCCGATGGAATTACCCAGGTCTCC
GTAGATAATAATCTGATATCGCGTGTTGACTCATCTCCGTCAAAGGCTATGAAAATTTTTATTTATCGCAATAAAATATG
GTAA

Upstream 100 bases:

>100_bases
AATATACTGCGTTATAAAAATGAGCGATTTTTGATAGTGGTAATTTTATTATGTTTTAGAATGCTCCCTGGGCAATATAA
TTTATTAAACAGGAGTGTAA

Downstream 100 bases:

>100_bases
ATACCAGCAATGCCTGAGACTACTAATCTGTTTAATTGTGGTGATAATAAGATAAAAAAATTCAATACTTCCCAAATCAT
CTGGAGACAGCACGTATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISEDSKLFNMLSEFKLLHSEYFE
WGDYSLWFQGFSIYDKTGFIMIEKSQGAGNPPIRHTLEFISTNIAEFLDKLTKITDARLCKGFSDWANSVKEGASNDFKE
NVDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPDWIEVLSLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVS
VDNNLISRVDSSPSKAMKIFIYRNKIW

Sequences:

>Translated_267_residues
MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISEDSKLFNMLSEFKLLHSEYFE
WGDYSLWFQGFSIYDKTGFIMIEKSQGAGNPPIRHTLEFISTNIAEFLDKLTKITDARLCKGFSDWANSVKEGASNDFKE
NVDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPDWIEVLSLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVS
VDNNLISRVDSSPSKAMKIFIYRNKIW
>Mature_267_residues
MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISEDSKLFNMLSEFKLLHSEYFE
WGDYSLWFQGFSIYDKTGFIMIEKSQGAGNPPIRHTLEFISTNIAEFLDKLTKITDARLCKGFSDWANSVKEGASNDFKE
NVDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPDWIEVLSLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVS
VDNNLISRVDSSPSKAMKIFIYRNKIW

Specific function: Unknown

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.flexneri ipaH 7.8 and Y.pestis yopM [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30335; Mature: 30335

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISE
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DSKLFNMLSEFKLLHSEYFEWGDYSLWFQGFSIYDKTGFIMIEKSQGAGNPPIRHTLEFI
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCEEEEECCCCCCCCHHHHHHHHH
STNIAEFLDKLTKITDARLCKGFSDWANSVKEGASNDFKENVDIALVRLFKCVELHNSKL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DLTDLHLGSLPPLPDWIEVLSLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVS
CEEEECCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCEEEE
VDNNLISRVDSSPSKAMKIFIYRNKIW
ECHHHHHHCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISE
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DSKLFNMLSEFKLLHSEYFEWGDYSLWFQGFSIYDKTGFIMIEKSQGAGNPPIRHTLEFI
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCEEEEECCCCCCCCHHHHHHHHH
STNIAEFLDKLTKITDARLCKGFSDWANSVKEGASNDFKENVDIALVRLFKCVELHNSKL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
DLTDLHLGSLPPLPDWIEVLSLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVS
CEEEECCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCEEEE
VDNNLISRVDSSPSKAMKIFIYRNKIW
ECHHHHHHCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8371104; 9278503 [H]