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The map label for this gene is ydfP

Identifier: 218705055

GI number: 218705055

Start: 1868946

End: 1869443

Strand: Reverse

Name: ydfP

Synonym: ECUMN_1840

Alternate gene names: 218705055

Gene position: 1869443-1868946 (Counterclockwise)

Preceding gene: 218705056

Following gene: 218705054

Centisome position: 35.94

GC content: 45.38

Gene sequence:

>498_bases
GTGAATCAGATATTCATGGTGATTTTTCTCGTGTTGTCAGGATTTATCGTCGGAAATGTCTGGAGCGACAGAGGATGGCA
AAAAAAATGGGCGGAACGTGATGCTGCCGCATTATCACAAGAGGTAAATGCTCAATTTGCTGCTCGAATAATTGAACAGG
GGCGAACTATAGCCCGTGATGAGGCTGTTAAAGATGCACAACAGAAATCTGCTGAAATTTCTGCCAGGGCTGCTTATCTG
TCTGATAGTGTTAACCAGTTGCGTGCCGAAGCAAAAAAATATGCCATACGCCTTGACGCAGCGAAGCATACCGCAGATCT
TGCCGCTGCCGTCAGAGGCAAAACAACCAAAACCGCCGAAGGAATGCTCACCAACATGCTCGGAGATATTGCAGCAGAAG
CTCAGCTTTATGCTGAAATTGCTGACGAACGCTACATCGCAGGAGTGACTTGTCAACAGATCTATGAATCTTTAAGAGAT
AAAAAGCATCAAATGTAG

Upstream 100 bases:

>100_bases
AGGATGGCGGACGCGATTGCCGCATTCGTTCAAATAACTGTTACGGTCAGGTTATTCGTCGTGACCAGGAGAGCGCATTA
ACCTGCTGGGGGATAGAACA

Downstream 100 bases:

>100_bases
GGTAATATTAAATCGGAACATTTACATCGCGGAATGTAAAATTTAAATAAAAAGGACTCTTCCATGAGCCAAAATTCCTG
AAATCTTAAGGGTAAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARDEAVKDAQQKSAEISARAAYL
SDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAEGMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRD
KKHQM

Sequences:

>Translated_165_residues
MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARDEAVKDAQQKSAEISARAAYL
SDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAEGMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRD
KKHQM
>Mature_165_residues
MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARDEAVKDAQQKSAEISARAAYL
SDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAEGMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRD
KKHQM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To phage N15 gp55

Homologues:

Organism=Escherichia coli, GI1787835, Length=165, Percent_Identity=100, Blast_Score=333, Evalue=3e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RZPQ_ECOLI (P76158)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   D64910
- RefSeq:   AP_002175.1
- RefSeq:   NP_416071.1
- STRING:   P76158
- EnsemblBacteria:   EBESCT00000002173
- EnsemblBacteria:   EBESCT00000017329
- GeneID:   946101
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1545
- KEGG:   eco:b1553
- EchoBASE:   EB3589
- EcoGene:   EG13828
- eggNOG:   NOG12240
- GeneTree:   EBGT00050000012093
- HOGENOM:   HBG673839
- OMA:   CERAYEA
- ProtClustDB:   CLSK891755
- BioCyc:   EcoCyc:G6826-MONOMER
- Genevestigator:   P76158
- InterPro:   IPR019659

Pfam domain/function: PF10721 DUF2514

EC number: NA

Molecular weight: Translated: 18310; Mature: 18310

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARD
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EAVKDAQQKSAEISARAAYLSDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRDKKHQM
HHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARD
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EAVKDAQQKSAEISARAAYLSDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRDKKHQM
HHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503