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The map label for this gene is stfR [H]

Identifier: 218705030

GI number: 218705030

Start: 1843927

End: 1846848

Strand: Reverse

Name: stfR [H]

Synonym: ECUMN_1814

Alternate gene names: 218705030

Gene position: 1846848-1843927 (Counterclockwise)

Preceding gene: 218705031

Following gene: 218705029

Centisome position: 35.5

GC content: 55.0

Gene sequence:

>2922_bases
GTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAA
AGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTCAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGG
ACGTTGAGTACGGGCAGTACAGCGTTATTCTGTTGGTGGAAGGATTCCCGCCGTCACATGCCGGGACCATCACCGTGTAT
GAAGATTCTCAACCCGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAGGATGATGCCCGTCCGGAGGCACTGCGCCG
TTTTGAACAGATGGTGGAAGAGGTGGCGCGTAACGCGTCCGTGGTGGCACAGAACACGGCAGCCGCGAAGAAGTCAGCCA
GTGATGCCGGCACATCTGCCCGTGAGGCGGCAACCCATGCGACTGATGCTGCAGATTCAGCACGTGCAGCCAGCACGTCA
GCCGGACAGGCCGCTTCGTCGGCTCAGTCAGCGTCTTCCAGCGCAGGAACGGCATCAACAAAGGCCACTGAAGCGGAAAA
AAGTGCTGCCGCTGCAGAGTCCTCAAAAAGCGCGGCAGCTACCAGTGCCGCTGCCGCGAAAACGTCAGAAACGAATGCTG
CAGCGTCACAACAATCAGCCGCCACTTCTGCATCCACCGCGACCACGAAAGCGTCAGAAGCTGCCACCTCAGCCCGGGAT
GCGTCGGCTTCAAAAGAGGCGGCAAAATCATCAGAAACGAACGCATCCTCGAGCGCCAGTAGCGCAGCTTCCTCGGCAAC
GGCGGCAGCAAATTCCGCGAAGGCGGCAAAAACGTCCGAGACGAACGCCAGGTCTTCTGAGACGGCAGCGGGACAGAGCG
CCTCAGCTGCGGCAGGCTCAAAAACAGCGGCTGCGTCGTCTGCCAGTGCCGCGTCAACAAGTGCCGGGCAGGCCTCAGCC
AGTGCCACCGCTGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCCGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCAC
TGAACAGGCCAGCGCAGCAGCGAGGTCTGCTTCCGCAGCGAAGACATCCGAGACGAACGCGAAAGCGTCGGAAACCAGCG
CAGAATCCTCAAAAACGGCTGCCGCATCGTCCGCCAGTTCGGCGGCGTCATCGGCATCATCTGCGTCTGCTTCAAAAGAT
GAGGCGACCAGACAGGCGTCAGCAGCAAAGGGCAGCGCCACGACGGCATCCACGAAGGCGACAGAGGCAGCTGGCAGTGC
GACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAGCGGCAAAACGGGCAGAGGATA
TTGCATCCGCCGTGGCGCTTGAGGATGCGAGCACGACGAAAAAGGGGATAGTACAGCTCAGCAGTGCGACTAACAGCACT
TCCGAGTCACTGGCGGCAACGCCAAAAGCCGTTAAGGCCGCGTATGAGCTGGCTAACGGGAAATACACCGCACAGGATGC
AACGACAGCACAAAAAGGGATAGTTCAGCTCAGCAGCGCGACCAACAGCACATCTGAAATGCTGGCGGCAACGCCAAAGT
CGGTAAAGGCAGCCTATGACCTTGCTAACGGGAAATATACTGCTCAGGACGCTACGACAGCACAAAAAGGAATTGTCCAG
CTCAGTAGTGCAACCAACAGCGCATCTGAAACGCTTGCCGCGACACCGAAAGCAGTGAAAGCAGCTAATGATAATGCGAA
TGGTCGGGTACCTTCTGCCCGTAAGGTGAATGGTAAGGCGCTTTCAGCGGATATAACACTGACGCCGAAAGATATTGGTA
CGCTTAACTCAACAACAATGTCATTCAGCGGTGGTGCTGGTTGGTTCAAATTAGCAACGGTAACCATGCCACAGGCGAGT
TCTGTTGTTTCAATTACGTTGATTGGTGGCGCGGGATTTAACGTGGGGTCACCTCAACAGGCAGGTATATCTGAACTTGT
TTTGCGTGCAGGTAATGGTAATCCGAAGGGGATTACTGGTGCTTTATGGCAGCGCACATCGACAGGGTTTACAAATTTTG
CCTGGGTCAATACATCTGGTGATACTTACGATATTTACGTTGCAATCGGAAATTATGCGACTGGTGTAAATATTCAATGG
GATTATACCAGTAATGCCAGCGTGACTATTCATACGTCACCAGCATATTCTGCTAATAAGCCGGAAGGGTTAACGGACGG
TACAGTTTATTCACTCTATACGCCATCAGAGCAGTTTTATCCGCCTGGCGCACCAATCCCGTGGCCATCAGATACCGTTC
CGTCTGGTTATGCCCTGATGCAGGGGCAGACTTTTGACAAATCCGCTTACCCGAAACTTGCAACCGCTTATCCGTCAGGC
GTGATCCCTGATATGCGTGGCTGGACGATTAAGGGCAAACCTGCCAGTGGTCGGGCCGTATTGTCTCAGGAACAGGACGG
CATTAAATCGCACACCCACAGCGCCAGTGCATCCAGTACGGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCA
CTAAATCCACGAATAACACCGGGGCGCATACGCACAGTGTGAGCGGTACAGCCGCAAGTGCCGGAAACCATACTCATAGT
GTCACAGGCGCATCAGCAGTCAGCCAGTGGTCACAAAATGGGTCAGTACATAAGGTAGTGTCTGCGGCCAGTGTGAATAC
AAGTGCTGCAGGAGCGCACACTCATAGTGTCAGCGGCACAGCTGCATCTGCAGGTGCTCACGCACATACTGTCGGTATTG
GTGCTCATACGCACTCTGTTGCGATTGGCTCACATGGACACACCATCACCGTTAACGCTGCTGGTAACGCGGAAAACACT
GTCAAAAACATCGCATTTAACTACATTGTGAGGCTTGCATAA

Upstream 100 bases:

>100_bases
CGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTT
CAGGCGGGCTTTTTTGTGGG

Downstream 100 bases:

>100_bases
TGGCATTCAGAATGAGTGAACAACCACGGACCATAAAAATTTATAATCTGCTGGCAGGAACTAATGAATTTATTGGTGAA
GGTGACGCATATATTCCGCC

Product: putative tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 973; Mature: 973

Protein sequence:

>973_residues
MNMAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVY
EDSQPGTLNDFLGAMTEDDARPEALRRFEQMVEEVARNASVVAQNTAAAKKSASDAGTSAREAATHATDAADSARAASTS
AGQAASSAQSASSSAGTASTKATEAEKSAAAAESSKSAAATSAAAAKTSETNAAASQQSAATSASTATTKASEAATSARD
ASASKEAAKSSETNASSSASSAASSATAAANSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASA
SATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASSASASKD
EATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNST
SESLAATPKAVKAAYELANGKYTAQDATTAQKGIVQLSSATNSTSEMLAATPKSVKAAYDLANGKYTAQDATTAQKGIVQ
LSSATNSASETLAATPKAVKAANDNANGRVPSARKVNGKALSADITLTPKDIGTLNSTTMSFSGGAGWFKLATVTMPQAS
SVVSITLIGGAGFNVGSPQQAGISELVLRAGNGNPKGITGALWQRTSTGFTNFAWVNTSGDTYDIYVAIGNYATGVNIQW
DYTSNASVTIHTSPAYSANKPEGLTDGTVYSLYTPSEQFYPPGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLATAYPSG
VIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGNHTHS
VTGASAVSQWSQNGSVHKVVSAASVNTSAAGAHTHSVSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENT
VKNIAFNYIVRLA

Sequences:

>Translated_973_residues
MNMAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVY
EDSQPGTLNDFLGAMTEDDARPEALRRFEQMVEEVARNASVVAQNTAAAKKSASDAGTSAREAATHATDAADSARAASTS
AGQAASSAQSASSSAGTASTKATEAEKSAAAAESSKSAAATSAAAAKTSETNAAASQQSAATSASTATTKASEAATSARD
ASASKEAAKSSETNASSSASSAASSATAAANSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASA
SATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASSASASKD
EATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNST
SESLAATPKAVKAAYELANGKYTAQDATTAQKGIVQLSSATNSTSEMLAATPKSVKAAYDLANGKYTAQDATTAQKGIVQ
LSSATNSASETLAATPKAVKAANDNANGRVPSARKVNGKALSADITLTPKDIGTLNSTTMSFSGGAGWFKLATVTMPQAS
SVVSITLIGGAGFNVGSPQQAGISELVLRAGNGNPKGITGALWQRTSTGFTNFAWVNTSGDTYDIYVAIGNYATGVNIQW
DYTSNASVTIHTSPAYSANKPEGLTDGTVYSLYTPSEQFYPPGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLATAYPSG
VIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGNHTHS
VTGASAVSQWSQNGSVHKVVSAASVNTSAAGAHTHSVSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENT
VKNIAFNYIVRLA
>Mature_973_residues
MNMAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVY
EDSQPGTLNDFLGAMTEDDARPEALRRFEQMVEEVARNASVVAQNTAAAKKSASDAGTSAREAATHATDAADSARAASTS
AGQAASSAQSASSSAGTASTKATEAEKSAAAAESSKSAAATSAAAAKTSETNAAASQQSAATSASTATTKASEAATSARD
ASASKEAAKSSETNASSSASSAASSATAAANSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASA
SATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASSASASKD
EATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNST
SESLAATPKAVKAAYELANGKYTAQDATTAQKGIVQLSSATNSTSEMLAATPKSVKAAYDLANGKYTAQDATTAQKGIVQ
LSSATNSASETLAATPKAVKAANDNANGRVPSARKVNGKALSADITLTPKDIGTLNSTTMSFSGGAGWFKLATVTMPQAS
SVVSITLIGGAGFNVGSPQQAGISELVLRAGNGNPKGITGALWQRTSTGFTNFAWVNTSGDTYDIYVAIGNYATGVNIQW
DYTSNASVTIHTSPAYSANKPEGLTDGTVYSLYTPSEQFYPPGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLATAYPSG
VIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGNHTHS
VTGASAVSQWSQNGSVHKVVSAASVNTSAAGAHTHSVSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENT
VKNIAFNYIVRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Escherichia coli, GI87081892, Length=494, Percent_Identity=97.165991902834, Blast_Score=449, Evalue=1e-127,
Organism=Escherichia coli, GI1787829, Length=241, Percent_Identity=77.5933609958506, Blast_Score=343, Evalue=3e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 96371; Mature: 96371

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQY
CCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCE
SVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFEQMVEEVARNAS
EEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCE
VVAQNTAAAKKSASDAGTSAREAATHATDAADSARAASTSAGQAASSAQSASSSAGTAST
EEECCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
KATEAEKSAAAAESSKSAAATSAAAAKTSETNAAASQQSAATSASTATTKASEAATSARD
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ASASKEAAKSSETNASSSASSAASSATAAANSAKAAKTSETNARSSETAAGQSASAAAGS
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCC
KTAAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATEQASAAARSASAA
CHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
KTSETNAKASETSAESSKTAAASSASSAASSASSASASKDEATRQASAAKGSATTASTKA
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHH
TEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNST
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCC
SESLAATPKAVKAAYELANGKYTAQDATTAQKGIVQLSSATNSTSEMLAATPKSVKAAYD
HHHHHCCHHHHHHHHHHCCCEEECCCHHHHHHHHEEEECCCCCHHHHHHCCCHHHHHHHH
LANGKYTAQDATTAQKGIVQLSSATNSASETLAATPKAVKAANDNANGRVPSARKVNGKA
CCCCEEECCCHHHHHHHHEEEECCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEE
LSADITLTPKDIGTLNSTTMSFSGGAGWFKLATVTMPQASSVVSITLIGGAGFNVGSPQQ
EEEEEEECCHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCC
AGISELVLRAGNGNPKGITGALWQRTSTGFTNFAWVNTSGDTYDIYVAIGNYATGVNIQW
CCHHHHHEECCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCEEEEEEEECCEEECCEEEE
DYTSNASVTIHTSPAYSANKPEGLTDGTVYSLYTPSEQFYPPGAPIPWPSDTVPSGYALM
EECCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCEEEE
QGQTFDKSAYPKLATAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASST
CCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHHCCCCCCCCC
DLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGNHTHSVTGASAVSQWSQNGSVHKVV
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
SAASVNTSAAGAHTHSVSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENT
EHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCHHH
VKNIAFNYIVRLA
HHHHHHHEEEECC
>Mature Secondary Structure
MNMAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQY
CCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCE
SVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFEQMVEEVARNAS
EEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCE
VVAQNTAAAKKSASDAGTSAREAATHATDAADSARAASTSAGQAASSAQSASSSAGTAST
EEECCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
KATEAEKSAAAAESSKSAAATSAAAAKTSETNAAASQQSAATSASTATTKASEAATSARD
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ASASKEAAKSSETNASSSASSAASSATAAANSAKAAKTSETNARSSETAAGQSASAAAGS
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCC
KTAAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATEQASAAARSASAA
CHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
KTSETNAKASETSAESSKTAAASSASSAASSASSASASKDEATRQASAAKGSATTASTKA
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHH
TEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNST
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCC
SESLAATPKAVKAAYELANGKYTAQDATTAQKGIVQLSSATNSTSEMLAATPKSVKAAYD
HHHHHCCHHHHHHHHHHCCCEEECCCHHHHHHHHEEEECCCCCHHHHHHCCCHHHHHHHH
LANGKYTAQDATTAQKGIVQLSSATNSASETLAATPKAVKAANDNANGRVPSARKVNGKA
CCCCEEECCCHHHHHHHHEEEECCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEE
LSADITLTPKDIGTLNSTTMSFSGGAGWFKLATVTMPQASSVVSITLIGGAGFNVGSPQQ
EEEEEEECCHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCC
AGISELVLRAGNGNPKGITGALWQRTSTGFTNFAWVNTSGDTYDIYVAIGNYATGVNIQW
CCHHHHHEECCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCEEEEEEEECCEEECCEEEE
DYTSNASVTIHTSPAYSANKPEGLTDGTVYSLYTPSEQFYPPGAPIPWPSDTVPSGYALM
EECCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCEEEE
QGQTFDKSAYPKLATAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASST
CCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHHCCCCCCCCC
DLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGNHTHSVTGASAVSQWSQNGSVHKVV
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
SAASVNTSAAGAHTHSVSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENT
EHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCHHH
VKNIAFNYIVRLA
HHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]