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The map label for this gene is yneL [H]

Identifier: 218704979

GI number: 218704979

Start: 1791585

End: 1791839

Strand: Reverse

Name: yneL [H]

Synonym: ECUMN_1762

Alternate gene names: 218704979

Gene position: 1791839-1791585 (Counterclockwise)

Preceding gene: 218704980

Following gene: 218704978

Centisome position: 34.44

GC content: 47.06

Gene sequence:

>255_bases
GTGCAAATGAACACACCCTCTTTCCATCAACACTTCAGACAGCTTGCGGGAATGAGTCCACTCCGGTATCAGAAATGGCT
ACGCCTCAATGAAGCCAGGCGACTGATGCTGAATGAACATTACGATGTCACCACTGCAGCCTATGCTGTCGGTTACGAAA
GCTTATCCCATTTCAGTCGGGAATATTCGCGGATGTTTGGAGAGTCACCTAAGAGAGATATTGCCAGGTTAAGAAAGTCT
GTCGATCAGCTTTAA

Upstream 100 bases:

>100_bases
TTCATGATTGGCCTGTGCATACCGGATATAGGCTGGCTGGTATGCAGGTTTGCCGTTTGCCGCATCTTCCCTGCGTTGAA
GAGTCAGGCTGGCAAACCGC

Downstream 100 bases:

>100_bases
TAAACCCTGCATTTATCTGGTTAGAGCAATTTGGCGTTAGTTTCAGAAAGCAAACATTAACCATAGCTAATGATTTTTAG
CCATATAAACCATTAGTAAC

Product: putative HTH-type transcriptional regulator yqhC (fragment)

Products: ADP; phosphate; 5-phosphoribosyl-n-formylglycineamidine; L-glutamate [C]

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MQMNTPSFHQHFRQLAGMSPLRYQKWLRLNEARRLMLNEHYDVTTAAYAVGYESLSHFSREYSRMFGESPKRDIARLRKS
VDQL

Sequences:

>Translated_84_residues
MQMNTPSFHQHFRQLAGMSPLRYQKWLRLNEARRLMLNEHYDVTTAAYAVGYESLSHFSREYSRMFGESPKRDIARLRKS
VDQL
>Mature_84_residues
MQMNTPSFHQHFRQLAGMSPLRYQKWLRLNEARRLMLNEHYDVTTAAYAVGYESLSHFSREYSRMFGESPKRDIARLRKS
VDQL

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082197, Length=77, Percent_Identity=42.8571428571429, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10052; Mature: 10052

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMNTPSFHQHFRQLAGMSPLRYQKWLRLNEARRLMLNEHYDVTTAAYAVGYESLSHFSR
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EYSRMFGESPKRDIARLRKSVDQL
HHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQMNTPSFHQHFRQLAGMSPLRYQKWLRLNEARRLMLNEHYDVTTAAYAVGYESLSHFSR
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EYSRMFGESPKRDIARLRKSVDQL
HHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 5'-phosphoribosyl-N-formylglycineamide; L-glutamine; H2O [C]

Specific reaction: ATP + 5'-phosphoribosyl-N-formylglycineamide + L-glutamine + H2O = ADP + phosphate + 5-phosphoribosyl-n-formylglycineamidine + L-glutamate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]