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The map label for this gene is ompN [H]

Identifier: 218704866

GI number: 218704866

Start: 1649903

End: 1651036

Strand: Reverse

Name: ompN [H]

Synonym: ECUMN_1643

Alternate gene names: 218704866

Gene position: 1651036-1649903 (Counterclockwise)

Preceding gene: 218704867

Following gene: 218704865

Centisome position: 31.74

GC content: 46.03

Gene sequence:

>1134_bases
ATGAAAAGCAAAGTACTGGCATTTTTAATTCCTACCCTGCTCGCCGCAGGTGCTGCACATGCAGCCGAAGTTTATAATAA
AGACGGCAACAAATTAGATCTGTATGGCAAAGTTGATGGACTACATTATTTTTCTGATAATTCAGCGAAAGATGGCGACC
AGAGCTATGCGCGTCTGGGTTTTAAAGGCGAAACCCAAATTAACGATCAACTTACTGGCTACGGTCAATGGGAATACAAT
ATTCAGGCAAACAACACTGAATCTTCAAAAAACCAGTCATGGACCCGTCTGGCATTTGCCGGATTGAAATTTGCAGATTA
CGGTTCTTTCGATTACGGACGTAATTATGGCGTAATGTACGACATCGAAGGCTGGACCGATATGCTGCCTGAATTTGGCG
GTGACTCTTATACCAATGCAGACAACTTTATGACTGGTCGTGCCAATGGCGTCGCGACTTATCGTAATACTGATTTCTTC
GGTCTGGTAAATGGTCTGAACTTCGCGGTGCAGTATCAAGGTAACAACGAAGGTGCCAGTAATGGTCAGGAAGGCACCAA
CAACGGACGTGATGTTCGCCATGAAAACGGTGACGGCTGGGGTCTTTCCACAACATATGATTTAGGCATGGGCTTTAGCG
CTGGTGCGGCATACACCTCTTCTGACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCG
TGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGTT
TGGCGACAGCGATTATGCTGTTGCTAACAAAACCCAGAACTTTGAAGTTACTGCACAGTACCAGTTTGATTTTGGTCTGC
GTCCGGCAGTCTCTTTCCTGATGTCTAAAGGCCGTGACCTGCACGCTGCCGGTGGTGCAGACAACCCGGCAGGTGTTGAT
GATAAAGATCTGGTTAAATACGCCGATGTTGGCGCGACTTACTATTTCAACAAAAATATGTCCACCTACGTTGACTATAA
AATCAACCTGTTGGATGAAGATGACAGCTTCTACGCTGCCAATGGCATCTCTACCGATGATATTGTCGCTTTAGGTCTGG
TTTATCAGTTCTAA

Upstream 100 bases:

>100_bases
CAAATGATATTTATCGGCTAACGGAACTTCTCCTTTAGGATGTTTTCACTCCCCAAAATGGGGATGAAAAGGCAAATAAA
ATAACTAAAGGATTTATTCA

Downstream 100 bases:

>100_bases
ATCCTCCTGCCCGCTGTTATGGCGGGCTTTTTCTGCTTATTCTTCCTCCTTTGATCTAAATTAAAAATGTGAACTCCGTC
ATTACACAAAAAGTGTCATC

Product: outer membrane pore protein N, non-specific

Products: NA

Alternate protein names: Porin ompN [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKSKVLAFLIPTLLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYN
IQANNTESSKNQSWTRLAFAGLKFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAYTSSDRTNDQVNHTAAGGDKADA
WTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVANKTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVD
DKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF

Sequences:

>Translated_377_residues
MKSKVLAFLIPTLLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYN
IQANNTESSKNQSWTRLAFAGLKFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAYTSSDRTNDQVNHTAAGGDKADA
WTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVANKTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVD
DKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF
>Mature_377_residues
MKSKVLAFLIPTLLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYN
IQANNTESSKNQSWTRLAFAGLKFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAYTSSDRTNDQVNHTAAGGDKADA
WTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVANKTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVD
DKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF

Specific function: Non-specific porin [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

Organism=Escherichia coli, GI1787641, Length=377, Percent_Identity=99.2042440318302, Blast_Score=758, Evalue=0.0,
Organism=Escherichia coli, GI1788544, Length=385, Percent_Identity=66.4935064935065, Blast_Score=469, Evalue=1e-133,
Organism=Escherichia coli, GI1786436, Length=378, Percent_Identity=59.5238095238095, Blast_Score=447, Evalue=1e-127,
Organism=Escherichia coli, GI1787160, Length=388, Percent_Identity=56.9587628865979, Blast_Score=402, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001897
- InterPro:   IPR001702 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41270; Mature: 41270

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKVLAFLIPTLLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDNSAKDGDQSYARLG
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCCHHHHCC
FKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGLKFADYGSFDYGRNYGVMY
CCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCEEE
DIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFFGLVNGLNFAVQYQGNNEGAS
EECCHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCCEEEEEECCCCCCCC
NGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAYTSSDRTNDQVNHTAAGGDKADA
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCEEECCCCCCCC
WTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVANKTQNFEVTAQYQFDFGLRPAVSFL
EECCEEECCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCHHHHHHH
MSKGRDLHAAGGADNPAGVDDKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDSFYAA
HHCCCEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCEEEEEEEEEEECCCCEEEE
NGISTDDIVALGLVYQF
CCCCHHHEEEEEEEECC
>Mature Secondary Structure
MKSKVLAFLIPTLLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDNSAKDGDQSYARLG
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCCHHHHCC
FKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGLKFADYGSFDYGRNYGVMY
CCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCEEE
DIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFFGLVNGLNFAVQYQGNNEGAS
EECCHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCCEEEEEECCCCCCCC
NGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAYTSSDRTNDQVNHTAAGGDKADA
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCEEECCCCCCCC
WTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVANKTQNFEVTAQYQFDFGLRPAVSFL
EECCEEECCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCHHHHHHH
MSKGRDLHAAGGADNPAGVDDKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDSFYAA
HHCCCEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCEEEEEEEEEEECCCCEEEE
NGISTDDIVALGLVYQF
CCCCHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9642192 [H]