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The map label for this gene is ynaI [H]

Identifier: 218704849

GI number: 218704849

Start: 1633293

End: 1634324

Strand: Reverse

Name: ynaI [H]

Synonym: ECUMN_1626

Alternate gene names: 218704849

Gene position: 1634324-1633293 (Counterclockwise)

Preceding gene: 218704851

Following gene: 218704846

Centisome position: 31.42

GC content: 43.31

Gene sequence:

>1032_bases
ATGATCGCTGAACTGTTTACAAATAATGCGCTTAATCTGGTCATTATTTTCGGTAGCTGCGCAGCATTGATTCTGATGAG
CTTTTGGTTTCGCCGCGGAAATCGTAAAAGAAAAGGTTTTTTATTCCATGCGGTGCAATTTTTAATCTACACCATAATTA
TCAGTGCTGTTGGTAGCATCATTAATTATGTTATAGAAAACTATAAACTCAAATTTATCACCCCAGGCGTTATCGATTTT
ATCTGTACGTCCCTGATTGCGGTTATTCTGACGATTAAGCTATTTCTGCTGATTAATCAGTTTGAAAAACAGCAGATTAA
AAAAGGTCGCGATATCACCAGTGCGCGGATTATGTCGCGTATCATCAAAATCACCATTATTGTGGTGCTTGTTCTGCTTT
ATGGCGAACATTTCGGCATGAGCCTTTCTGGCTTGTTGACCTTTGGTGGTATTGGTGGTCTGGCTGTCGGTATGGCCGGT
AAAGATATTCTGAGTAACTTCTTTTCCGGGATTATGCTCTATTTCGACCGTCCTTTTAGTATTGGCGACTGGATCCGTTC
ACCGGACAGAAATATCGAAGGTACAGTATCGGAAATTGGCTGGCGAATTACCAAGATTACGACTTTTGATAATCGTCCGT
TGTACGTACCGAACTCGCTGTTTTCGTCAATCAGCGTAGAAAACCCAGGACGAATGACCAACCGGCGCATTACCACGACC
ATTGGTTTACGTTATGAGGATGCGGCAAAAGTGGGCGTTATTGTCGAAGCCGTACGTGAGATGCTGAAAAATCACCCGGC
CATTGACCAGCGACAAACCTTACTGGTTTATTTCAACCAGTTTGCTGACTCCTCATTGAATATTATGGTTTATTGCTTTA
CCAAAACCACGGTATGGGCTGAATGGCTTGCTGCACAGCAAGACGTTTATTTGAAGATTATCGATATTGTACAGTCACAC
GGCGCGGACTTTGCCTTCCCCAGCCAGACGCTGTATATGGATAACATTACACCGCCGGACCAGGGTCGCTAA

Upstream 100 bases:

>100_bases
TTCCCTGACTATTGATGATCTCAATGAATTGTCGCGGTAAAATAGCCCCGCCAGGGGTTTCCGGCATGACGACAATTATC
TGGAGGAGCCTGATAAAACA

Downstream 100 bases:

>100_bases
ATCAGACATCACTGGCGTTATCCACAAGGGTAACGCCAATTCCCATCACATCAATGCTTCACAATATACATAGTCCGACT
GTACGCCACATCTTCCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDF
ICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVSEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTT
IGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSH
GADFAFPSQTLYMDNITPPDQGR

Sequences:

>Translated_343_residues
MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDF
ICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVSEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTT
IGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSH
GADFAFPSQTLYMDNITPPDQGR
>Mature_343_residues
MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDF
ICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVSEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTT
IGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSH
GADFAFPSQTLYMDNITPPDQGR

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=343, Percent_Identity=99.4169096209913, Blast_Score=697, Evalue=0.0,
Organism=Escherichia coli, GI1789291, Length=236, Percent_Identity=22.4576271186441, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786670, Length=180, Percent_Identity=27.7777777777778, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 38757; Mature: 38757

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS01246 UPF0003

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSI
CCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
INYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSR
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC
IGDWIRSPDRNIEGTVSEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTT
HHHHHCCCCCCCCCCHHHHCEEEEEEEEECCCCEECCHHHHHHCCCCCCCCCCCCEEEEE
IGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWA
EEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECHHHHH
EWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPDQGR
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSI
CCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
INYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSR
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC
IGDWIRSPDRNIEGTVSEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTT
HHHHHCCCCCCCCCCHHHHCEEEEEEEEECCCCEECCHHHHHHCCCCCCCCCCCCEEEEE
IGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWA
EEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECHHHHH
EWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPDQGR
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]