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The map label for this gene is ldrB [H]

Identifier: 218704738

GI number: 218704738

Start: 1523491

End: 1523598

Strand: Reverse

Name: ldrB [H]

Synonym: ECUMN_1513

Alternate gene names: 218704738

Gene position: 1523598-1523491 (Counterclockwise)

Preceding gene: 218704739

Following gene: 218704731

Centisome position: 29.29

GC content: 56.48

Gene sequence:

>108_bases
ATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATTACCGCAGCGAT
TGTCAGCTGGTGGCGTAACCGGAAGTAA

Upstream 100 bases:

>100_bases
ACGTTGAGAGGTATAACCTGACAACAGAACGGGGGCTAATCTTGAACCAGAACAATTCAAGAATAGCCGCAAAATGTTGT
CATTACAACAAGGCGGCTAT

Downstream 100 bases:

>100_bases
GGTGAAAACGGGCGTCAGGCTGCCGTGATGGCAATATGCGCCCGAAACCGGCCGCAGGAGTAACAGCCTGCGGCCTTTTT
TGTATCCGGCCCCATGAAAA

Product: toxic polypeptide, small

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 35; Mature: 34

Protein sequence:

>35_residues
MTLAQFAMTFWHDLAAPILAGIITAAIVSWWRNRK

Sequences:

>Translated_35_residues
MTLAQFAMTFWHDLAAPILAGIITAAIVSWWRNRK
>Mature_34_residues
TLAQFAMTFWHDLAAPILAGIITAAIVSWWRNRK

Specific function: Toxic peptide whose overexpression causes rapid cell killing and nucleoid condensation of the host cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the toxic peptide ldr family [H]

Homologues:

Organism=Escherichia coli, GI48994881, Length=35, Percent_Identity=97.1428571428571, Blast_Score=71, Evalue=2e-14,
Organism=Escherichia coli, GI48994882, Length=35, Percent_Identity=97.1428571428571, Blast_Score=70, Evalue=2e-14,
Organism=Escherichia coli, GI48994880, Length=35, Percent_Identity=97.1428571428571, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4002; Mature: 3871

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAQFAMTFWHDLAAPILAGIITAAIVSWWRNRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLAQFAMTFWHDLAAPILAGIITAAIVSWWRNRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]