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The map label for this gene is ymfB [H]

Identifier: 218704608

GI number: 218704608

Start: 1408592

End: 1409053

Strand: Reverse

Name: ymfB [H]

Synonym: ECUMN_1378

Alternate gene names: 218704608

Gene position: 1409053-1408592 (Counterclockwise)

Preceding gene: 218704609

Following gene: 218704607

Centisome position: 27.09

GC content: 49.78

Gene sequence:

>462_bases
ATGTTTAAACCGCACGTTACCGTTGCTTGCGTGGTGCACGCAGAAGGCAAATTTTTAGTCGTTGAAGAGACGATTAATGG
TAAAGCGTTATGGAACCAACCTGCCGGGCATCTGGAAGCCAATGAAACCTTAGTGGAAGCCGCCGCCCGTGAGCTGTGGG
AAGAAACCGGCATCAGCGCGCAGCCGCAACACTTTATTCGTATGCATCAGTGGATTGCGCCAGATAAAACGCCGTTTTTG
CGTTTCCTGTTTGCTATTGAGCTTGAGCAAATATGCCCGACCCAGCCTCATGACAGCGATATCGACTGCTGCCGTTGGGT
TAGCGCCGAAGAAATTTTACAGGCGTCAAATCTGCGTTCGCCGCTGGTGGCGGAAAGTATTCGTTGTTATCAAAGCAGGC
AACGCTATCCGCTAGAGATGATTGGCGATTTTAACTGGCCTTTTACAAAGGGTGTCATCTAA

Upstream 100 bases:

>100_bases
TTTCCCCACGCTGCGACTGATTCGCTATGCGATGGGTGATTACTCTTTGGATAATCTTGCCAACGGCGAATGGCGAGAAG
CGACAGATTAAGGACGCAAA

Downstream 100 bases:

>100_bases
AAGGCTGCGTGATAGAATACGCCGCCTTGAAGTTCAATGTCGTGAGTGATCCAATGTCTGAAACCGCAAAAAAAGTAATC
GTCGGCATGTCCGGCGGTGT

Product: bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEANETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFL
RFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSRQRYPLEMIGDFNWPFTKGVI

Sequences:

>Translated_153_residues
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEANETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFL
RFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSRQRYPLEMIGDFNWPFTKGVI
>Mature_153_residues
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEANETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFL
RFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSRQRYPLEMIGDFNWPFTKGVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=153, Percent_Identity=98.6928104575163, Blast_Score=315, Evalue=6e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 17531; Mature: 17531

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEANETLVEAAARELWEETGISA
CCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
QPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHCCCC
PLVAESIRCYQSRQRYPLEMIGDFNWPFTKGVI
CHHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCC
>Mature Secondary Structure
MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEANETLVEAAARELWEETGISA
CCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
QPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHCCCC
PLVAESIRCYQSRQRYPLEMIGDFNWPFTKGVI
CHHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA