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The map label for this gene is ydfD [H]

Identifier: 218704539

GI number: 218704539

Start: 1354147

End: 1354350

Strand: Reverse

Name: ydfD [H]

Synonym: ECUMN_1306

Alternate gene names: 218704539

Gene position: 1354350-1354147 (Counterclockwise)

Preceding gene: 218704540

Following gene: 218704538

Centisome position: 26.03

GC content: 45.1

Gene sequence:

>204_bases
ATGAACACATTATTCGTACTCATTCTGACTGTACATCTCAATACTGGTGAGTCGCTTGATGCAATCACCGGCATGTACAA
CTCAATGAAAGAATGCATGGCTGCCGCAGCGGAACAGAAAATTCCCGGCAACTGTTATCCGGTCGATAAAGTTATTCACA
TGGACAATAACGAAATCCCGGCGGGGCTTAAAACAGCACCGTAA

Upstream 100 bases:

>100_bases
ATGCAATCAATATGAGAAAATATGAACCCTACCTGCTGAATGACAATTCCATACTCTCCAGAATTGCCCTTCTTAAACTC
GGTATTTTCGGAGAGTGGCG

Downstream 100 bases:

>100_bases
TTAATATCCGGTTTCATTTTTATATGCCAGCAATGGCAGGGATTTGTTCACCCTTAAATCTGTAATGAGGTTTATCAATG
AGCACTGATAAAGAAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MNTLFVLILTVHLNTGESLDAITGMYNSMKECMAAAAEQKIPGNCYPVDKVIHMDNNEIPAGLKTAP

Sequences:

>Translated_67_residues
MNTLFVLILTVHLNTGESLDAITGMYNSMKECMAAAAEQKIPGNCYPVDKVIHMDNNEIPAGLKTAP
>Mature_67_residues
MNTLFVLILTVHLNTGESLDAITGMYNSMKECMAAAAEQKIPGNCYPVDKVIHMDNNEIPAGLKTAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787858, Length=63, Percent_Identity=66.6666666666667, Blast_Score=93, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009954 [H]

Pfam domain/function: PF07358 DUF1482 [H]

EC number: NA

Molecular weight: Translated: 7251; Mature: 7251

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLFVLILTVHLNTGESLDAITGMYNSMKECMAAAAEQKIPGNCYPVDKVIHMDNNEIP
CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC
AGLKTAP
CCCCCCC
>Mature Secondary Structure
MNTLFVLILTVHLNTGESLDAITGMYNSMKECMAAAAEQKIPGNCYPVDKVIHMDNNEIP
CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC
AGLKTAP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3041373; 9097039; 9278503 [H]