Click here to switch to the map view.

The map label for this gene is yceB [H]

Identifier: 218704471

GI number: 218704471

Start: 1287616

End: 1288176

Strand: Reverse

Name: yceB [H]

Synonym: ECUMN_1237

Alternate gene names: 218704471

Gene position: 1288176-1287616 (Counterclockwise)

Preceding gene: 218704472

Following gene: 218704470

Centisome position: 24.76

GC content: 47.42

Gene sequence:

>561_bases
ATGAACAAGTTTTTATTTGCCGCTGCATTGATCGTCAGTGGCCTGCTCGTTGGCTGTAATCAACTCACCCAATACACCAT
CACCGAACAAGAAATTAACCAGTCGCTTGCGAAACATAATAATTTCTCAAAAGATATCGGTTTACCCGGCGTGGCTGACG
CCCATATTGTTCTGACAAACCTGACCAGCCAAATTGGTCGCGAAGAGCCGAATAAGGTTACCTTAACCGGAGACGCCAAT
CTGGACATGAACTCCCTGTTCGGTAGCCAGAAAGCGACCATGAAACTGAAGCTGAAAGCGCTGCCCGTGTTTGATAAAGA
AAAAGGTGCGATCTTCCTGAAAGAGATGGAAGTGGTCGATGCGACGGTACAACCGGAAAAAATGCAAACGGTGATGCAAA
CGTTGCTCCCCTATTTGAACCAGGCATTACGCAATTACTTTAACCAGCAACCAGCTTACGTCCTGCACGAAGATGGCAGC
CAGGGCGAAGCAATGGCGAAGAAACTGGCGAAAGGCATTGAAGTGAAGCCAGGCGAAATTGTCATTCCGTTTACGGATTA
A

Upstream 100 bases:

>100_bases
TTGCCGCCGTTTTCAGTTTTTTCTGCTGGCGCGTTTATCGCTGGTGACACATGCTGCGTTGTGTCAGGATATTGACGCAG
ATTTCATGTCGAGGACTACC

Downstream 100 bases:

>100_bases
TCACGAGGGCGCATTCGCGCCCTTTATTTTTCGTGCAAAGGAAAACGTTTCCGCTTATCCTTTGTGTCCGGCAAAAACAT
CCCTTCAGCCGGAGCATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDAN
LDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLHEDGS
QGEAMAKKLAKGIEVKPGEIVIPFTD

Sequences:

>Translated_186_residues
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDAN
LDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLHEDGS
QGEAMAKKLAKGIEVKPGEIVIPFTD
>Mature_186_residues
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDAN
LDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLHEDGS
QGEAMAKKLAKGIEVKPGEIVIPFTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787302, Length=186, Percent_Identity=99.4623655913979, Blast_Score=378, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010835 [H]

Pfam domain/function: PF07273 DUF1439 [H]

EC number: NA

Molecular weight: Translated: 20481; Mature: 20481

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTN
CCHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVD
HHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEEEECCCEECCCCEEEEEHHHHHH
ATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLHEDGSQGEAMAKKLAKGIEVKPGEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCE
VIPFTD
EEEECC
>Mature Secondary Structure
MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTN
CCHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVD
HHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEEEECCCEECCCCEEEEEHHHHHH
ATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLHEDGSQGEAMAKKLAKGIEVKPGEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCE
VIPFTD
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2876892; 8905232; 9278503 [H]