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The map label for this gene is ycbZ [H]

Identifier: 218704378

GI number: 218704378

Start: 1198721

End: 1200481

Strand: Reverse

Name: ycbZ [H]

Synonym: ECUMN_1144

Alternate gene names: 218704378

Gene position: 1200481-1198721 (Counterclockwise)

Preceding gene: 218704380

Following gene: 218704377

Centisome position: 23.08

GC content: 51.9

Gene sequence:

>1761_bases
TTGACCATTACGAAACTTGCATGGCGTGACCTGGTTCCTGATACCGATAGCTATCAGGAAATATTTGCTCAGCCACATTT
GATTGACGAAAACGATCCTTTATTCAGTGATACTCAACCGCGACTGCAATTTGCGCTGGAGCAGTTGCTGCATACGCGAG
CATCCTCCTCTTTTATGCTGGCGAAGGCCCCGGAAGAGTCTGAGTATCTGAATCTTATTGCCGATGCCGCGCGTGCGCTA
CAAAGCGATGCAGGCCAACTGGTGGGCGGTCACTATGAGGTTTCCGGGCACACCATCCGCTTACGTAACACAGTGAGTGC
AGATGATAATTTTGCGACTTTAACGCAAGTTGTCGCTGCCGACTGGGTAGAAGCGGAGCAACTCTTTGGCTGCCTGCGCC
AGTTTAATGGCGACATTACCCTGCAGCCAGGTCTGGTGCATCAGGCAAATGGCGGTATTCTCATCATCTCTTTGCGTACA
CTGCTGGCGCAACCTCTGCTGTGGATGCGGCTGAAAAATATCGTTAACCGCGGGCGTTTTGACTGGGTTGCGTTTGATGA
GTCGCGCCCTCTCCCCGTCTCTGTGCCTTCGATGCCATTGAAGCTGAAAGTCATTCTGGTAGGCGAACGCGAATCATTGG
CTGATTTCCAGGAGATGGAGCCAGAGCTTTCAGAGCAGGCTATTTATAGCGAATTTGAAGATACTCTGCAGATTGTCGAT
GCGGAGTCAGTAAGCCAGTGGTGTCGCTGGGTGACATTTACCGCCAGACATAATCACTTACCTGCACCGGGAGCGGATGC
CTGGCCGGTGCTTATCCGCGAAGCAGCACGCTACACCGGTGAACAAGAAACACTTCCGCTTAGCCCGCAGTGGATCCTCC
GCCAGTGTAAAGAGGTCGCCTCCCTGTGTGATGGCGACACCTTCTCCGGCGAGCAGCTAAACTTAATGCTACAGCAGCGT
GAATGGCGCGAAGGTTTCCTCGCTGAACGCATGCAGGATGAGATTCTTCAGGAGCAAATCCTGATTGAAACCGAAGGCGA
ACGCATCGGGCAAATTAACGCCCTTTCGGTCATTGAATTTCCGGGTCATCCACGCGCTTTTGGCGAACCTTCTCGCATTA
GCTGCGTTGTGCATATTGGCGATGGTGAATTCACCGACATCGAACGCAAAGCGGAGCTTGGCGGCAATATCCATGCGAAA
GGGATGATGATCATGCAGGCGTTCCTGATGTCGGAACTACAGCTTGAGCAACAGATCCCCTTCTCAGCATCGCTGACATT
TGAGCAGTCATACAGTGAAGTGGATGGCGATAGTGCCTCGATGGCTGAACTCTGCGCCCTGATAAGCGCCCTCGCCGATG
TGCCGGTGAATCAGAGTATCGCTATCACAGGTTCAGTCGATCAGTTCGGTCGTGCCCAGCCGGTCGGTGGTTTAAATGAG
AAAATCGAAGGCTTCTTTGCTATTTGCCAGCAACGTGAGTTAACTGGGAAACAAGGTGTCATTATCCCCACTGCTAACAT
TCGCCATTTAAGTCTTCACAGTGAACTGGTGAAAGCGGTAGAAGAAGGCAAATTCACCATCTGGGCAGTAGACGATGTGA
CTGACGCACTGCCGTTATTATTAAATCTGGTGTGGGATGGCGAAGGCCAAACGACGCTGATGCAAACCATCCAGGAACGT
ATCGCGCAAGCATCGCAACAGGAAGGACGTCACCGTTTTCCATGGCCATTACGTTGGCTGAACTGGTTTATTCCGAACTG
A

Upstream 100 bases:

>100_bases
TAACGCCCATGCCAGGAGTATTGTCGGTGCTTTCTACGTGTGCTGCAGTGCCGGTTACGGTATAATCGCGGCTTTGACAA
CAGACTAAAAAACATCAACT

Downstream 100 bases:

>100_bases
TCGGACTTGTTCAGCGTACACGTGTTAGCTATCCTGCGTGCTTCAATAAAATAAGGCTTACAGAGAACATGGTAGATAAA
CGCGAATCCTATACAAAAGA

Product: putative ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFMLAKAPEESEYLNLIADAARAL
QSDAGQLVGGHYEVSGHTIRLRNTVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
LLAQPLLWMRLKNIVNRGRFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD
AESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQR
EWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAK
GMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE
KIEGFFAICQQRELTGKQGVIIPTANIRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQER
IAQASQQEGRHRFPWPLRWLNWFIPN

Sequences:

>Translated_586_residues
MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFMLAKAPEESEYLNLIADAARAL
QSDAGQLVGGHYEVSGHTIRLRNTVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
LLAQPLLWMRLKNIVNRGRFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD
AESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQR
EWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAK
GMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE
KIEGFFAICQQRELTGKQGVIIPTANIRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQER
IAQASQQEGRHRFPWPLRWLNWFIPN
>Mature_585_residues
TITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFMLAKAPEESEYLNLIADAARALQ
SDAGQLVGGHYEVSGHTIRLRNTVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTL
LAQPLLWMRLKNIVNRGRFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVDA
ESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQRE
WREGFLAERMQDEILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKG
MMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNEK
IEGFFAICQQRELTGKQGVIIPTANIRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERI
AQASQQEGRHRFPWPLRWLNWFIPN

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=586, Percent_Identity=98.4641638225256, Blast_Score=1186, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.-

Molecular weight: Translated: 65725; Mature: 65594

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFML
CCCCHHHHHHCCCCCCHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
AKAPEESEYLNLIADAARALQSDAGQLVGGHYEVSGHTIRLRNTVSADDNFATLTQVVAA
EECCCHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHH
DWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTLLAQPLLWMRLKNIVNRGRF
HHHHHHHHHHHHHHHCCCEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCE
DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD
EEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
AESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVA
HHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SLCDGDTFSGEQLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEF
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEC
PGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP
CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC
FSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE
CCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCCCCHH
KIEGFFAICQQRELTGKQGVIIPTANIRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLL
HHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHCCCEEEEEECHHHHHHHHH
LNLVWDGEGQTTLMQTIQERIAQASQQEGRHRFPWPLRWLNWFIPN
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFML
CCCHHHHHHCCCCCCHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
AKAPEESEYLNLIADAARALQSDAGQLVGGHYEVSGHTIRLRNTVSADDNFATLTQVVAA
EECCCHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHH
DWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTLLAQPLLWMRLKNIVNRGRF
HHHHHHHHHHHHHHHCCCEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCE
DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD
EEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
AESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVA
HHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SLCDGDTFSGEQLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEF
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEC
PGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP
CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC
FSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE
CCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCCCCHH
KIEGFFAICQQRELTGKQGVIIPTANIRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLL
HHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHCCCEEEEEECHHHHHHHHH
LNLVWDGEGQTTLMQTIQERIAQASQQEGRHRFPWPLRWLNWFIPN
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]