| Definition | Escherichia coli UMN026 chromosome, complete genome. |
|---|---|
| Accession | NC_011751 |
| Length | 5,202,090 |
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The map label for this gene is 218704103
Identifier: 218704103
GI number: 218704103
Start: 920871
End: 921563
Strand: Reverse
Name: 218704103
Synonym: ECUMN_0867
Alternate gene names: NA
Gene position: 921563-920871 (Counterclockwise)
Preceding gene: 218704114
Following gene: 218704102
Centisome position: 17.72
GC content: 41.7
Gene sequence:
>693_bases ATGAACATAGGAAACCGAGTCAGACAACTTCGCCAAGCGAAGAACATGAAAATCGCCGATCTCGCTGAAGCAATAGGAGT AGATGCGGCGAACATCTCGCGCTTAGAAACGGGTAAGCAAAAACAATTTACCGAACAAACACTGAGTAATATTGCCAAGA GCTTAGGTGTTGATATTGCTGATCTCTTTACCTCTGCCCTCAAAAGTAATACTGTATATAAAAACAGTAATAATGAGGAT GTTGCGCAGGTGAAGGATGTGTTCCGTATTGAAATGCTGGATATCAGTGCCAGTGCGGGAAATGGCCTTATCCAGGGCGG TGATGTCATTGATGTGATTCATGCCATCGAATACAGAACTGATAATGCTGTATCAATGTTCGGCGGACGACCAGCCAATC ACATCAAAGTTATCAACGTTCGTGGGGACAGTATGTGTCCAACCATTGAGCCAGGAGATCTCATCTTCGTTGATGTCAGC ATCAATCAGTTTGATGGTGATGGTATATATGTCTTTGGTTTTGATGACAAAATATACGTTAAAAGACTTCAAATGATTCC TGACAAACTGCTGGTGATTTCTGATAACCAGATTTACCGTGAATGGGGAATTACTAGCGAAAACGAACACCGATTTATGG TCTTTGGAAAGGTCTTAATCAGTCAGTCGCAAACCCTTAAGAGACATAATTAA
Upstream 100 bases:
>100_bases CATATACCCTCCAAATATTGCGCGTTATGCATGTTATTTCACGCAATTATTTTGCGCAAGTTGATTTGCTTATCACGCAA TAAAGAAATGTAATAAACGC
Downstream 100 bases:
>100_bases CCTCAATATCCCATCCATCGGCCACCGAAAGGTGGCTTTTTATTACCCACCGTTTTGCATATTTCGCAAATATTACTTGC ATATCTCGCAATTTAATTTT
Product: putative transcriptional regulator from phage origin
Products: NA
Alternate protein names: Transcriptional Regulator; Prophage; Regulatory Protein; Regulatory Protein CI Bacteriophage Origin; Transcriptional Activator-Regulatory Protein; Bacteriophage Repressor; Prophage MuSo1 Transcriptional Regulator Cro/CI Family; Bacteriophage Transcriptional Regulator; Phage Reprossor; Prophage Transcriptional Regulator; Regulatory Prophage Protein CI; LexA Family Repressor/S24 Family Protease; Peptidase; Transcription Regulator; Phage Repressor CI; Regulatory Protein CI Bacteriophage Origin
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNIGNRVRQLRQAKNMKIADLAEAIGVDAANISRLETGKQKQFTEQTLSNIAKSLGVDIADLFTSALKSNTVYKNSNNED VAQVKDVFRIEMLDISASAGNGLIQGGDVIDVIHAIEYRTDNAVSMFGGRPANHIKVINVRGDSMCPTIEPGDLIFVDVS INQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNQIYREWGITSENEHRFMVFGKVLISQSQTLKRHN
Sequences:
>Translated_230_residues MNIGNRVRQLRQAKNMKIADLAEAIGVDAANISRLETGKQKQFTEQTLSNIAKSLGVDIADLFTSALKSNTVYKNSNNED VAQVKDVFRIEMLDISASAGNGLIQGGDVIDVIHAIEYRTDNAVSMFGGRPANHIKVINVRGDSMCPTIEPGDLIFVDVS INQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNQIYREWGITSENEHRFMVFGKVLISQSQTLKRHN >Mature_230_residues MNIGNRVRQLRQAKNMKIADLAEAIGVDAANISRLETGKQKQFTEQTLSNIAKSLGVDIADLFTSALKSNTVYKNSNNED VAQVKDVFRIEMLDISASAGNGLIQGGDVIDVIHAIEYRTDNAVSMFGGRPANHIKVINVRGDSMCPTIEPGDLIFVDVS INQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNQIYREWGITSENEHRFMVFGKVLISQSQTLKRHN
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25624; Mature: 25624
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIGNRVRQLRQAKNMKIADLAEAIGVDAANISRLETGKQKQFTEQTLSNIAKSLGVDIA CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH DLFTSALKSNTVYKNSNNEDVAQVKDVFRIEMLDISASAGNGLIQGGDVIDVIHAIEYRT HHHHHHHHCCCEEECCCCCHHHHHHHHHEEEEEEEECCCCCCEECCCCHHHHHHHHHCCC DNAVSMFGGRPANHIKVINVRGDSMCPTIEPGDLIFVDVSINQFDGDGIYVFGFDDKIYV CCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCHHHH KRLQMIPDKLLVISDNQIYREWGITSENEHRFMVFGKVLISQSQTLKRHN HHHHHCCCEEEEEECCEEEECCCCCCCCCCEEEEEEHHHHCCHHHHHCCC >Mature Secondary Structure MNIGNRVRQLRQAKNMKIADLAEAIGVDAANISRLETGKQKQFTEQTLSNIAKSLGVDIA CCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH DLFTSALKSNTVYKNSNNEDVAQVKDVFRIEMLDISASAGNGLIQGGDVIDVIHAIEYRT HHHHHHHHCCCEEECCCCCHHHHHHHHHEEEEEEEECCCCCCEECCCCHHHHHHHHHCCC DNAVSMFGGRPANHIKVINVRGDSMCPTIEPGDLIFVDVSINQFDGDGIYVFGFDDKIYV CCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCHHHH KRLQMIPDKLLVISDNQIYREWGITSENEHRFMVFGKVLISQSQTLKRHN HHHHHCCCEEEEEECCEEEECCCCCCCCCCEEEEEEHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA