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The map label for this gene is ybdF [H]

Identifier: 218703911

GI number: 218703911

Start: 721475

End: 721978

Strand: Reverse

Name: ybdF [H]

Synonym: ECUMN_0669

Alternate gene names: 218703911

Gene position: 721978-721475 (Counterclockwise)

Preceding gene: 218703912

Following gene: 218703910

Centisome position: 13.88

GC content: 47.82

Gene sequence:

>504_bases
TTGAGTATTTTGTTCTGCGCTTTATCTGGCGACGCTGGTTCTCGCTGGCGGATTAAACGTCGATTATCGCCGAACTTCGC
GGCATACTTTGCTTATTCTCCTTCGCCTAAAGGAACGTTTATGGATAAGCAATCACCGCACGAAACGACGAAACGCCTGG
CCCTTGAGTTACCCTTTGTCGAGCTTTGCTGGCCTTTTGGCCCGGAGTTCGATGTTTTTAAAATTGGCGGCAAGATTTTT
ATGCTGTCGTCGGAGCTGCGCGGCGTCCCCTTTATCAATCTGAAGTCCGATCCACAAAAATCCCTGCTAAATCAGCAAAT
ATACCCAAGCATCAAGCCAGGGTATCACATGAATAAAAAGCACTGGATTTCGGTGTATCCCGGCGAGGAAATCTCCGAAG
CGTTACTTCGCGATCTGATCAACGATTCGTGGAATCTGGTGGTTGATGGTCTGGCTAAACGCGATCAAAAACGACTGCGT
CCTTACTCAACCGTAAATCAATAG

Upstream 100 bases:

>100_bases
CTGACGCTGGCACAAAAACTGGTGACCACGTTCCATCTGATGGATCTTAGCCAGCTTTACACTTTATTGTTTTGTCTGTG
GTTTTTAGTGCTGGGCGCTA

Downstream 100 bases:

>100_bases
CGCATTTTTCTCGCTTACCATTTCATCTCGATCCTTGTAATCTGCTGGCACGCAAAATTACTTTCACATGGAGTCTTTAT
GGATATCATTTCTGTCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSILFCALSGDAGSRWRIKRRLSPNFAAYFAYSPSPKGTFMDKQSPHETTKRLALELPFVELCWPFGPEFDVFKIGGKIF
MLSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRLR
PYSTVNQ

Sequences:

>Translated_167_residues
MSILFCALSGDAGSRWRIKRRLSPNFAAYFAYSPSPKGTFMDKQSPHETTKRLALELPFVELCWPFGPEFDVFKIGGKIF
MLSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRLR
PYSTVNQ
>Mature_166_residues
SILFCALSGDAGSRWRIKRRLSPNFAAYFAYSPSPKGTFMDKQSPHETTKRLALELPFVELCWPFGPEFDVFKIGGKIFM
LSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRLRP
YSTVNQ

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786793, Length=121, Percent_Identity=97.5206611570248, Blast_Score=245, Evalue=9e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 19167; Mature: 19036

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILFCALSGDAGSRWRIKRRLSPNFAAYFAYSPSPKGTFMDKQSPHETTKRLALELPFV
CEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHH
ELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKK
HEECCCCCCCCEEEECCEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
HWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRLRPYSTVNQ
EEEEECCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SILFCALSGDAGSRWRIKRRLSPNFAAYFAYSPSPKGTFMDKQSPHETTKRLALELPFV
EEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHH
ELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKK
HEECCCCCCCCEEEECCEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
HWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRLRPYSTVNQ
EEEEECCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]