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The map label for this gene is ybbJ [H]

Identifier: 218703779

GI number: 218703779

Start: 601384

End: 601839

Strand: Reverse

Name: ybbJ [H]

Synonym: ECUMN_0535

Alternate gene names: 218703779

Gene position: 601839-601384 (Counterclockwise)

Preceding gene: 218703780

Following gene: 218703777

Centisome position: 11.57

GC content: 58.33

Gene sequence:

>456_bases
ATGGAGTTAATGGTCGTTCATCCACATATTTTCTGGCTCAGTCTCGGCGGGTTGCTGCTGGCAGCCGAGATGCTGGGCGG
AAATGGTTATTTGTTGTGGAGCGGCGTGGCAGCGGTGATTACCGGTCTGGTGGTCTGGCTGGTGCCGCTGGGTTGGGAGT
GGCAAGGGGTGATGTTTGCCGTCCTGACGCTGCTCGCCGCCTGGCTGTGGTGGAAATGGTTGTCGCGGCGGGTGCGCGAA
CAAAAGCACAGCGACAGTCATTTAAACCAGCGCGGGCAGCAGCTTATTGGCCGACGTTTTGTGCTGGAATCTCCGCTGGT
CAACGGGCGAGGTCATATGCGCGTCGGTGACAGTTCATGGCCTGTCAGCGCCAGCGAGGATCTCGGTGCAGGTACGCATG
TTGAAGTCATTGCGATAGAAGGGATAACGCTGATCATCCGTGCGGTCATCGCCTGA

Upstream 100 bases:

>100_bases
AAGTAGTGATGATGCCATTAGAGGCCAGCAGCCTGATGGGGTCGATTGCCGGGATTGCCGAGCTGGTGAAAGACAGCGCC
AACAAACGGACTCAGCCATG

Downstream 100 bases:

>100_bases
TGCGACGCTGACGCGTCTTTTCATGCCTACAAAATATGCCCGAATTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC
GGTTATGCGCTGATGCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPLGWEWQGVMFAVLTLLAAWLWWKWLSRRVRE
QKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLIIRAVIA

Sequences:

>Translated_151_residues
MELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPLGWEWQGVMFAVLTLLAAWLWWKWLSRRVRE
QKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLIIRAVIA
>Mature_151_residues
MELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPLGWEWQGVMFAVLTLLAAWLWWKWLSRRVRE
QKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLIIRAVIA

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=149, Percent_Identity=98.6577181208054, Blast_Score=287, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 16780; Mature: 16780

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPLGWEWQGVMFA
CCEEEECCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VLTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSW
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
PVSASEDLGAGTHVEVIAIEGITLIIRAVIA
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHC
>Mature Secondary Structure
MELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPLGWEWQGVMFA
CCEEEECCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VLTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSW
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
PVSASEDLGAGTHVEVIAIEGITLIIRAVIA
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]