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The map label for this gene is yadN [H]

Identifier: 218703397

GI number: 218703397

Start: 160317

End: 160913

Strand: Reverse

Name: yadN [H]

Synonym: ECUMN_0138

Alternate gene names: 218703397

Gene position: 160913-160317 (Counterclockwise)

Preceding gene: 218703398

Following gene: 218703396

Centisome position: 3.09

GC content: 44.22

Gene sequence:

>597_bases
ATGGAATATAATTCAAGGATTATTATGTCTAAAAAATTAGGTTTTGCCCTGTCTGGTCTTATGCTGGCAATGGTTGCAGG
TACTGCTTCTGCTGATATGGACGGTGGTCAGATTAACATCAGTGGCTTGGTTAGCGATAACACCTGTGAAACAAAAGTTG
ATGGCGGCAAGCAAGATGGCCTGGTTCTTCTGCAAACTGCAACGGTTGCTGAAATTACCGCTGGTGTATCTGAAACTGCT
GTCGGTGCCAAAGCGAAACCGTTTAGCATTACTGTAGACTGCAGCAAAGCGACTCCGGGAGGCCAACCGACTCTGACATT
CGGTTCAGTTTTCTTTGGTAACAGTCGTGGCACTTTGAATAACGATATGTCCATCACCACCCCGTCATCTGGTGTGAATA
TCGCCCTGCACAACATTGACGGCACCACTGTTAAACAAGTCAAAATTAATAATGCATCTGATGCTTACACTAAAGCATTA
ACCAATAATGTTGCAGTCTTTGACTTCAAAGCCTCCTATGTTCGTGAAGACGACTCAACACCAGCAACGGCTGGTTATGT
AAGAACCAACACAGCTTACACCATCACCTACAATTAA

Upstream 100 bases:

>100_bases
ATGTTACATTCAGTAAATCTTCACATTCATCATTAACAAAACAATCTATTTTTCTCTATCGGGGTTCTTTGTCTGAAAGC
ACCCGATTGTAGTTAAACTC

Downstream 100 bases:

>100_bases
GTTATTCGTTGGTGATTTAAATTACTACAAGGGTGCGACACCTATTGTCGCCCCCTTGTCTTGAAAACAATTCATGTCAT
GGATGGTATATTTTGTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MEYNSRIIMSKKLGFALSGLMLAMVAGTASADMDGGQINISGLVSDNTCETKVDGGKQDGLVLLQTATVAEITAGVSETA
VGAKAKPFSITVDCSKATPGGQPTLTFGSVFFGNSRGTLNNDMSITTPSSGVNIALHNIDGTTVKQVKINNASDAYTKAL
TNNVAVFDFKASYVREDDSTPATAGYVRTNTAYTITYN

Sequences:

>Translated_198_residues
MEYNSRIIMSKKLGFALSGLMLAMVAGTASADMDGGQINISGLVSDNTCETKVDGGKQDGLVLLQTATVAEITAGVSETA
VGAKAKPFSITVDCSKATPGGQPTLTFGSVFFGNSRGTLNNDMSITTPSSGVNIALHNIDGTTVKQVKINNASDAYTKAL
TNNVAVFDFKASYVREDDSTPATAGYVRTNTAYTITYN
>Mature_198_residues
MEYNSRIIMSKKLGFALSGLMLAMVAGTASADMDGGQINISGLVSDNTCETKVDGGKQDGLVLLQTATVAEITAGVSETA
VGAKAKPFSITVDCSKATPGGQPTLTFGSVFFGNSRGTLNNDMSITTPSSGVNIALHNIDGTTVKQVKINNASDAYTKAL
TNNVAVFDFKASYVREDDSTPATAGYVRTNTAYTITYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786334, Length=193, Percent_Identity=77.720207253886, Blast_Score=291, Evalue=2e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 20615; Mature: 20615

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYNSRIIMSKKLGFALSGLMLAMVAGTASADMDGGQINISGLVSDNTCETKVDGGKQDG
CCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEECCCCCCCC
LVLLQTATVAEITAGVSETAVGAKAKPFSITVDCSKATPGGQPTLTFGSVFFGNSRGTLN
EEEEEECCEEHHHCCCCHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCC
NDMSITTPSSGVNIALHNIDGTTVKQVKINNASDAYTKALTNNVAVFDFKASYVREDDST
CCEEEECCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHCCEEEEEEEHHEEECCCCC
PATAGYVRTNTAYTITYN
CCEECEEECCEEEEEEEC
>Mature Secondary Structure
MEYNSRIIMSKKLGFALSGLMLAMVAGTASADMDGGQINISGLVSDNTCETKVDGGKQDG
CCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEECCCCCCCC
LVLLQTATVAEITAGVSETAVGAKAKPFSITVDCSKATPGGQPTLTFGSVFFGNSRGTLN
EEEEEECCEEHHHCCCCHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCC
NDMSITTPSSGVNIALHNIDGTTVKQVKINNASDAYTKALTNNVAVFDFKASYVREDDST
CCEEEECCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHCCEEEEEEEHHEEECCCCC
PATAGYVRTNTAYTITYN
CCEECEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]