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The map label for this gene is yehB [H]

Identifier: 218703279

GI number: 218703279

Start: 19238

End: 21688

Strand: Reverse

Name: yehB [H]

Synonym: ECUMN_0019

Alternate gene names: 218703279

Gene position: 21688-19238 (Counterclockwise)

Preceding gene: 218703280

Following gene: 218703278

Centisome position: 0.42

GC content: 41.37

Gene sequence:

>2451_bases
ATGTTAAGGACGACACGATGGGTCGCTGCTATTATTTTTTTGTATTCTTTTCCGGGTTATGCTGAAGAAACTTTTGATAC
ACACTTTATGATCGGCGGCATGAGAGGAGAAAAAGTTTCCGAATATCGTTTCGATAATAAACAACCTCTTCCGGGAAACT
ACGAACTTGATGTTTATGTAAACCACCAGTGGCGTGGGAAACAAGATATCACGATCCCAGAGTCACCAGCCAAACCATGT
CTGCCTAAGGTGCTACTAACCACACTGGGGGTAAAGACCGATAATCTCAATACAGAAGATAATTGTATTTTACTGGATGA
AGCGGTTCATGGTGGACAATATCAGTGGGATATCAGTGAACACCGACTAAATTTAACGATCCCACAGGCGTATATCAATG
AACTTGAAAGAGGTTACGTTCCCCCGGAAAGTTGGGATCGCGGCATTGATGCTTTTTATACCTCCTATAATTTAAGTCAG
TATCGCTCTTATGACAGCAATAATAACAGTAATACAGCCAGTTATGGCCGGTTCAACAGCGGATTAAATTTATTTAGTTG
GCAGTTACACTCTGATGCCAGTTATAGCAAACCTGATGATATGAAAGGCAAATGGCAAAGTAATACTCTTTACCTGGAAC
GTGGCTGGTCGCAAATATTAAGCACAGTTCAGATAGGAGAAAATTACACATCCTCACTCATATTCGACTCTCTGCGATTT
AGCGGAATACGCTTATTTCGCGATATGCAAATGCTACCTGATTCTATGCAAAGCTTTACACCTTTAGTACAAGGTGTTGC
GCAAAGTAACGCCTTGATAACGGTTTCGCAAAATGGCTATACCATTTACCAAAAAGAGGTTCCCCCAGGACCATTTACTA
TCGCAGATTTGCAACTTTCGGGCAGCGGCTCTGATCTCGATGTCAGCATTAAGGAAGCAGATGGTAGTGTTCGTTCCTTT
TTGGTGCCCTACTCTTCCGTGCCCAATATGCTGCAACCTGGTGTTTCAAATTTCGATTTTATCGCCGGACGCAGTCAGAT
ATATGGTGTCAAGAATCAGGAGGACTTTCTCGAGGCAAATTATATATATGGCCTCAACAATCTTTTGACACTTTATGGCG
GTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGAGCAATCTCTTTTGAT
GCTACCCGATCGAGTAGTAAGTTAAATAATGATACCAGACACGAAGGTACGAGCTATCAGGTCGCCTATAATAAATATCT
ATTGCAAACGGCTACTCACTTTAGCGTGGCCGCCTGGCGTTATGCTTCGCAGGATTACAGGACATTCAGCGACCATCTTT
ACGAAAATGATAAAATAAATCATCAGAGTGATGATGACGATTTTTATGATATTGGCAGAAAAAATAGCCTTTCTGCCAAT
ATCATGCAACCTTTATCCAATAATCTGGGAAATGTATCATTAAGTGCACTTTGGCGGAATTACTGGGGGCGAAGTGGAAA
TGCTAAAGATTACCAATTCAGTTATTCCAATAGCTGGCAACGCATCAGTTATACTTTCTCTGCCAGCCAATCCTATGATG
AAAACGACAAAGAAGAGGAGCGTTTTAATCTGTTTATCTCCATTCCTTTCTACTGGGGGGATGATATTGCCAAAACACGT
CACCAAATTAACTTATCGAATTCGACCTCATTTTCCAAAGATGGCTATTCCTCCAACAATACTGGAATTACTGGCATAGC
CGGTGAACATGATCAGTTAAATTATGGTATATATGTTAATCAGCAACAACAAAATAATGATACCTCGCTTGGTACGAATT
TAAGCTGGAGAACTCCCATCGCCACAATAGATGGCAGCTATAGCCATTCTAAAAACGCCTGGCAAAGTGGTGGAAGTATT
AGTAGTGGATTAGTTGTCTGGCCCGGTGGTATTAATATAACTAACCAGTTATCCGATACATTTGCAATTCTGGATGCGCC
TGGGTTAGAAGGCGCGCATATTAATGGACAAAAATACAACCGAACAAACAGCAAAGGCCAGGTTGTTTACGACCTGATGA
TACCTCATCGTGAAAACCATCTGGTACTTGATATAGCAAACAGTGAAAGTGAAACAGAATTGCAGGGCAATCGTCAAATT
ATTGCGCCTTACCGTGGAGCAGTTTCTTATGTGCAGTTTACAACTGACCAACGTAAGCCCTGGTATATACAGGCACTGCG
TCCCGATGGTTCGCCATTAACCTTTGGCTATGACGTACTGGATCTCCAGGAAAACAATATTGGAGTCGTTGGCCAGGGTA
GTCGCCTTTTTATTCGCGTAGATGAAATTCCCACTGGCATCAAAGTTGCTCTCAATGATGAACAGAACTTATTCTGTACT
ATTACTTTTCAACACGTTATCGATGAAAACAAAACATATATATGCCAGTAA

Upstream 100 bases:

>100_bases
ATTAAAAAATAACCACGCATCAGAATATGAACTAACGGTAGTTGATGATTACGGGAATAACATCCATAGTAAAATCGCCG
CACGATAACAGGAAAAAGTC

Downstream 100 bases:

>100_bases
AAGGAGTTTACTATGAAGTGGCTTTTATTAATCACCTTGAGTCTATATTCTTTTATTGTGCAAAGTGCTCCCTGTGCAGT
GACCAATGTCGGTGAACAAC

Product: putative fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDVYVNHQWRGKQDITIPESPAKPC
LPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISEHRLNLTIPQAYINELERGYVPPESWDRGIDAFYTSYNLSQ
YRSYDSNNNSNTASYGRFNSGLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLSGSGSDLDVSIKEADGSVRSF
LVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEANYIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFD
ATRSSSKLNNDTRHEGTSYQVAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDDDDFYDIGRKNSLSAN
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEERFNLFISIPFYWGDDIAKTR
HQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVNQQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSI
SSGLVVWPGGINITNQLSDTFAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRVDEIPTGIKVALNDEQNLFCT
ITFQHVIDENKTYICQ

Sequences:

>Translated_816_residues
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDVYVNHQWRGKQDITIPESPAKPC
LPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISEHRLNLTIPQAYINELERGYVPPESWDRGIDAFYTSYNLSQ
YRSYDSNNNSNTASYGRFNSGLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLSGSGSDLDVSIKEADGSVRSF
LVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEANYIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFD
ATRSSSKLNNDTRHEGTSYQVAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDDDDFYDIGRKNSLSAN
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEERFNLFISIPFYWGDDIAKTR
HQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVNQQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSI
SSGLVVWPGGINITNQLSDTFAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRVDEIPTGIKVALNDEQNLFCT
ITFQHVIDENKTYICQ
>Mature_816_residues
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDVYVNHQWRGKQDITIPESPAKPC
LPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISEHRLNLTIPQAYINELERGYVPPESWDRGIDAFYTSYNLSQ
YRSYDSNNNSNTASYGRFNSGLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLSGSGSDLDVSIKEADGSVRSF
LVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEANYIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFD
ATRSSSKLNNDTRHEGTSYQVAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDDDDFYDIGRKNSLSAN
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEERFNLFISIPFYWGDDIAKTR
HQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVNQQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSI
SSGLVVWPGGINITNQLSDTFAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRVDEIPTGIKVALNDEQNLFCT
ITFQHVIDENKTYICQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1788427, Length=826, Percent_Identity=58.5956416464891, Blast_Score=1043, Evalue=0.0,
Organism=Escherichia coli, GI1786332, Length=845, Percent_Identity=33.1360946745562, Blast_Score=416, Evalue=1e-117,
Organism=Escherichia coli, GI1790772, Length=851, Percent_Identity=30.4347826086957, Blast_Score=377, Evalue=1e-105,
Organism=Escherichia coli, GI1787172, Length=837, Percent_Identity=28.673835125448, Blast_Score=323, Evalue=4e-89,
Organism=Escherichia coli, GI1786744, Length=837, Percent_Identity=30.2270011947431, Blast_Score=322, Evalue=9e-89,
Organism=Escherichia coli, GI1789533, Length=815, Percent_Identity=27.6073619631902, Blast_Score=302, Evalue=6e-83,
Organism=Escherichia coli, GI87081778, Length=525, Percent_Identity=31.4285714285714, Blast_Score=226, Evalue=4e-60,
Organism=Escherichia coli, GI1789610, Length=855, Percent_Identity=22.6900584795322, Blast_Score=112, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92109; Mature: 92109

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDVYV
CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCEEEEEEE
NHQWRGKQDITIPESPAKPCLPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHH
HRLNLTIPQAYINELERGYVPPESWDRGIDAFYTSYNLSQYRSYDSNNNSNTASYGRFNS
CEEEEEECHHHHHHHHHCCCCCHHHCCCCHHEEEECCHHHHHCCCCCCCCCCCCCCCCCC
GLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHH
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCEEEEEEEEC
GSGSDLDVSIKEADGSVRSFLVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEAN
CCCCCEEEEEECCCCCEEEEECCCCCCCHHHCCCCCCCEEECCCCCEEECCCHHHHEEEE
YIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFDATRSSSKLNNDTRHEGTSYQ
EEECHHHHHHHHCCEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE
VAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDDDDFYDIGRKNSLSAN
EEEHEEEEHHHCHHEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHH
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEE
HHHHHHCCCCCEEHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCC
RFNLFISIPFYWGDDIAKTRHQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVN
EEEEEEEEEEEECCHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEE
QQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSISSGLVVWPGGINITNQLSDT
CCCCCCCCCCCCCCEECCCEEEECCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCE
FAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
EEEEECCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEE
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRV
EEECCCCEEEEEEECCCCCCEEEEEECCCCCEEEECEEEEEECCCCEEEEECCCEEEEEE
DEIPTGIKVALNDEQNLFCTITFQHVIDENKTYICQ
CCCCCCEEEEECCCCCEEEEEEEHHHHCCCCEEEEC
>Mature Secondary Structure
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDVYV
CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCEEEEEEE
NHQWRGKQDITIPESPAKPCLPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHH
HRLNLTIPQAYINELERGYVPPESWDRGIDAFYTSYNLSQYRSYDSNNNSNTASYGRFNS
CEEEEEECHHHHHHHHHCCCCCHHHCCCCHHEEEECCHHHHHCCCCCCCCCCCCCCCCCC
GLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHH
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCEEEEEEEEC
GSGSDLDVSIKEADGSVRSFLVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEAN
CCCCCEEEEEECCCCCEEEEECCCCCCCHHHCCCCCCCEEECCCCCEEECCCHHHHEEEE
YIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFDATRSSSKLNNDTRHEGTSYQ
EEECHHHHHHHHCCEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE
VAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDDDDFYDIGRKNSLSAN
EEEHEEEEHHHCHHEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHH
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEE
HHHHHHCCCCCEEHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCC
RFNLFISIPFYWGDDIAKTRHQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVN
EEEEEEEEEEEECCHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEE
QQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSISSGLVVWPGGINITNQLSDT
CCCCCCCCCCCCCCEECCCEEEECCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCE
FAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
EEEEECCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEE
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRV
EEECCCCEEEEEEECCCCCCEEEEEECCCCCEEEECEEEEEECCCCEEEEECCCEEEEEE
DEIPTGIKVALNDEQNLFCTITFQHVIDENKTYICQ
CCCCCCEEEEECCCCCEEEEEEEHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]