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The map label for this gene is papF

Identifier: 218702829

GI number: 218702829

Start: 4792241

End: 4792741

Strand: Direct

Name: papF

Synonym: ECIAI39_4594

Alternate gene names: 218702829

Gene position: 4792241-4792741 (Clockwise)

Preceding gene: 218702828

Following gene: 218702830

Centisome position: 93.38

GC content: 43.91

Gene sequence:

>501_bases
ATGGCTCGTTTATCATTATTTATATCGTTGCTTCTGACATCGGTCGCTGTACTGGCTGATGTGCAGATTAACATCAGGGG
AAATGTTTATATCCCCCCATGCACCATTAATAACGGGCAGAATATTGTTGTCGATTTTGGGAATATTAATCCTGAGCACG
TGGACAACTCACGTGGTGAAATCACAAAAACCATAAGCATATCCTGTACGTATAAGAGTGGCTCACCCTGGATAAAGGTC
ACAGGTAATGCAATGGCTGGGCAGACTAATGTACTGGCAACAAATATAGCCAATTTTGGTATAGCGTTGTATCAGGGAAA
AGGAATGTCAACACCTCTTACATTAGGTAATGGTTCAGGAAATGGTTACAGAGTGACAGCAGGTCTGGACACAGCACGTT
CAACGTTCACCTTTACTTCAGTGCCCTTTCGTAATGGCAGCAGGACACTGAATGGCGGGGATTTCCGGACCACGGCCAGT
ATGAGCATGATTTATAACTGA

Upstream 100 bases:

>100_bases
CAACGCTGGTTGCATCATATTCGTAATGCTATCAGTTAAAATACGCCGATTTTATATCTCATAAAATAAAATATTTTCTG
TACCGCTCTCCGGAGGGGGA

Downstream 100 bases:

>100_bases
GTCATACCTAAATGAATAACTGTAATTACGGAAGTGATTTCTGATGAAAAAATGGTTCCCAGCTTTGTTATTTTCCTTGT
GTGTGTCTGGTGAGTCCTCT

Product: fimbrial adapter PapF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MARLSLFISLLLTSVAVLADVQINIRGNVYIPPCTINNGQNIVVDFGNINPEHVDNSRGEITKTISISCTYKSGSPWIKV
TGNAMAGQTNVLATNIANFGIALYQGKGMSTPLTLGNGSGNGYRVTAGLDTARSTFTFTSVPFRNGSRTLNGGDFRTTAS
MSMIYN

Sequences:

>Translated_166_residues
MARLSLFISLLLTSVAVLADVQINIRGNVYIPPCTINNGQNIVVDFGNINPEHVDNSRGEITKTISISCTYKSGSPWIKV
TGNAMAGQTNVLATNIANFGIALYQGKGMSTPLTLGNGSGNGYRVTAGLDTARSTFTFTSVPFRNGSRTLNGGDFRTTAS
MSMIYN
>Mature_165_residues
ARLSLFISLLLTSVAVLADVQINIRGNVYIPPCTINNGQNIVVDFGNINPEHVDNSRGEITKTISISCTYKSGSPWIKVT
GNAMAGQTNVLATNIANFGIALYQGKGMSTPLTLGNGSGNGYRVTAGLDTARSTFTFTSVPFRNGSRTLNGGDFRTTASM
SMIYN

Specific function: Adapter that links the papG adhesin to the distal end of the tip fibrillum. PapF is required for the correct presentation of the adhesin at the distal end of the tip fibrillum. Pili are polar filaments radiating from the surface of the bacterium to a leng

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Fimbrium. Note=At the tip of the pili [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR005430 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17648; Mature: 17517

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSLFISLLLTSVAVLADVQINIRGNVYIPPCTINNGQNIVVDFGNINPEHVDNSRGE
CHHHHHHHHHHHHHHHHHEEEEEEECCCEEECCEEECCCCEEEEECCCCCHHHCCCCCCC
ITKTISISCTYKSGSPWIKVTGNAMAGQTNVLATNIANFGIALYQGKGMSTPLTLGNGSG
EEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCC
NGYRVTAGLDTARSTFTFTSVPFRNGSRTLNGGDFRTTASMSMIYN
CCEEEEECCCCCCCEEEEEECCCCCCCEEECCCCEEEEEEEEEEEC
>Mature Secondary Structure 
ARLSLFISLLLTSVAVLADVQINIRGNVYIPPCTINNGQNIVVDFGNINPEHVDNSRGE
HHHHHHHHHHHHHHHHHEEEEEEECCCEEECCEEECCCCEEEEECCCCCHHHCCCCCCC
ITKTISISCTYKSGSPWIKVTGNAMAGQTNVLATNIANFGIALYQGKGMSTPLTLGNGSG
EEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCC
NGYRVTAGLDTARSTFTFTSVPFRNGSRTLNGGDFRTTASMSMIYN
CCEEEEECCCCCCCEEEEEECCCCCCCEEECCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2869489; 2895103; 1357526; 8096174; 10049807 [H]