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The map label for this gene is papE

Identifier: 218702828

GI number: 218702828

Start: 4791627

End: 4792166

Strand: Direct

Name: papE

Synonym: ECIAI39_4593

Alternate gene names: 218702828

Gene position: 4791627-4792166 (Clockwise)

Preceding gene: 218702827

Following gene: 218702829

Centisome position: 93.37

GC content: 42.41

Gene sequence:

>540_bases
TTGTACAGGATATTTCAGATGAAAAAGATAAGAGGTTTGTGTCTTCCGGTAATACTGGGGGCAGTGTTAATGTCTCAGCA
TGCACATGCAGCTGATAATCTGACCTTTAAAGGAAAACTGATTATTCCAGCCTGTACTGTAACAAAGGCAGAGGTTGACT
GGGGAAATGTAGAGATTCAGAAGCTGGTACAGAGTGGCGGAAATCAGAAAGACTTTACCGTCGACATGAACTGCCCCTAT
AGCCTGGGAACCATGAAAGTTACAATAACATCAAATGGTCAGACCGGTAATTCGATACTGGTGCCTGATACTTCAACCGC
TTCTGGTGATGGGCTGCTCATTTATCTTTACAATAGTAATAACAGTGGTATTAGTAACGCTGTCACTTTAGGGAGTCAGT
TTACGCCCGGAAAAATCACAGGAACAGCACCAGCCAGAAAGATTACTCTTTACGCAAAACTTGGATATAAAGGAAATATG
CAGAGTTTGAAGGCGGGAACATTTTCTGCAACAGCAACGCTGGTTGCATCATATTCGTAA

Upstream 100 bases:

>100_bases
ATGTTGTGGCAACGCCGGAAGCCCTGCGGACGAAGAGTGTGGTACCCGGTGATTATGAAGCAACAGCCACGTTTGAATTA
ACATATCGTTAGCAAAATTT

Downstream 100 bases:

>100_bases
TGCTATCAGTTAAAATACGCCGATTTTATATCTCATAAAATAAAATATTTTCTGTACCGCTCTCCGGAGGGGGAATGGCT
CGTTTATCATTATTTATATC

Product: fimbrial tip protein PapE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MYRIFQMKKIRGLCLPVILGAVLMSQHAHAADNLTFKGKLIIPACTVTKAEVDWGNVEIQKLVQSGGNQKDFTVDMNCPY
SLGTMKVTITSNGQTGNSILVPDTSTASGDGLLIYLYNSNNSGISNAVTLGSQFTPGKITGTAPARKITLYAKLGYKGNM
QSLKAGTFSATATLVASYS

Sequences:

>Translated_179_residues
MYRIFQMKKIRGLCLPVILGAVLMSQHAHAADNLTFKGKLIIPACTVTKAEVDWGNVEIQKLVQSGGNQKDFTVDMNCPY
SLGTMKVTITSNGQTGNSILVPDTSTASGDGLLIYLYNSNNSGISNAVTLGSQFTPGKITGTAPARKITLYAKLGYKGNM
QSLKAGTFSATATLVASYS
>Mature_179_residues
MYRIFQMKKIRGLCLPVILGAVLMSQHAHAADNLTFKGKLIIPACTVTKAEVDWGNVEIQKLVQSGGNQKDFTVDMNCPY
SLGTMKVTITSNGQTGNSILVPDTSTASGDGLLIYLYNSNNSGISNAVTLGSQFTPGKITGTAPARKITLYAKLGYKGNM
QSLKAGTFSATATLVASYS

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Fimbrium. Note=At the tip of the pili [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- InterPro:   IPR004086 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18991; Mature: 18991

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRIFQMKKIRGLCLPVILGAVLMSQHAHAADNLTFKGKLIIPACTVTKAEVDWGNVEIQ
CCEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECEEEEEEEEEEEEECCCCCHHHH
KLVQSGGNQKDFTVDMNCPYSLGTMKVTITSNGQTGNSILVPDTSTASGDGLLIYLYNSN
HHHHCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEECCC
NSGISNAVTLGSQFTPGKITGTAPARKITLYAKLGYKGNMQSLKAGTFSATATLVASYS
CCCCCCEEEECCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MYRIFQMKKIRGLCLPVILGAVLMSQHAHAADNLTFKGKLIIPACTVTKAEVDWGNVEIQ
CCEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECEEEEEEEEEEEEECCCCCHHHH
KLVQSGGNQKDFTVDMNCPYSLGTMKVTITSNGQTGNSILVPDTSTASGDGLLIYLYNSN
HHHHCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEECCC
NSGISNAVTLGSQFTPGKITGTAPARKITLYAKLGYKGNMQSLKAGTFSATATLVASYS
CCCCCCEEEECCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1357526 [H]