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The map label for this gene is ecfH

Identifier: 218701921

GI number: 218701921

Start: 3806173

End: 3806748

Strand: Direct

Name: ecfH

Synonym: ECIAI39_3647

Alternate gene names: 218701921

Gene position: 3806173-3806748 (Clockwise)

Preceding gene: 218701920

Following gene: 218701924

Centisome position: 74.16

GC content: 53.82

Gene sequence:

>576_bases
ATGAAGGCATTATCGCCAATCGCAGTCCTTCTTTCCGCGCTGCTGTTGCAAGGTTGTGTTGCCGCTGCCGTAGTGGGTAC
CGCTGCTGTGGGTACCAAAGCCGCAACGGACCCACGCAGTGTCGGCACCCAGGTGGACGATGGTACCCTGGAAGTGCGCG
TAAACAGCGCATTGTCGAAAGACGAACAGATTAAGAAAGAAACCCGTATTAATGTCACGGCGTATCAGGGCAAAGTGCTG
TTGGTTGGGCAGTCACCAAACGCTGAACTTTCGGCTCGCGCTAAACAAATTGCGATGGGCGTAGACGGTGCCAACGAAGT
GTATAACGAGATTCGTCAGGGCCAGCCGATTAGTCTGGGCGAAGCGTCTAACGATACGTGGATCACCACCAAAGTGCGTT
CGCAGCTGTTAACCAGCGACCTGGTGAAATCGTCCAACGTGAAAGTGACCACCGAAAACGGTGAAGTGTTCCTGATGGGG
CTGGTGACTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTAAAGCGTGTAACTACGGCGTT
TACGTTTATTAAATAG

Upstream 100 bases:

>100_bases
TAGTGCTCGCATTCAGGAGATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCTCACC
AGGATGTTTAAGGAGAATAC

Downstream 100 bases:

>100_bases
CTGCCCTTGTAATGCCTGATGCGACGCTTGCAGCGTCTTATCAGGCCTACAACGATGCAAACCGTAGGTCGGATAAGGCG
TTTACGCCGCATCCGACATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKALSPIAVLLSALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKETRINVTAYQGKVL
LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPISLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
LVTEREAKAAADIASRVSGVKRVTTAFTFIK

Sequences:

>Translated_191_residues
MKALSPIAVLLSALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKETRINVTAYQGKVL
LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPISLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
LVTEREAKAAADIASRVSGVKRVTTAFTFIK
>Mature_191_residues
MKALSPIAVLLSALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKETRINVTAYQGKVL
LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPISLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
LVTEREAKAAADIASRVSGVKRVTTAFTFIK

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=191, Percent_Identity=98.4293193717278, Blast_Score=376, Evalue=1e-106,
Organism=Escherichia coli, GI1790836, Length=183, Percent_Identity=31.1475409836066, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 20088; Mature: 20088

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALSPIAVLLSALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCC
DEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPISLG
HHHHHHHHEEEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
EASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGV
CCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHH
KRVTTAFTFIK
HHHHHHHHCCC
>Mature Secondary Structure
MKALSPIAVLLSALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCC
DEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPISLG
HHHHHHHHEEEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
EASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGV
CCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHH
KRVTTAFTFIK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]