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The map label for this gene is ysgA

Identifier: 218701470

GI number: 218701470

Start: 3310683

End: 3311561

Strand: Direct

Name: ysgA

Synonym: ECIAI39_3172

Alternate gene names: 218701470

Gene position: 3310683-3311561 (Clockwise)

Preceding gene: 218701468

Following gene: 218701471

Centisome position: 64.51

GC content: 53.7

Gene sequence:

>879_bases
GTGATTTGTTGCATGCTGACTATAGTTAACATTGCGCAACATTTTTATAAGGGTACGGAGAATACCATGGCAACAACACA
ACAATCTGGATTTGCACCTGCGGCATCGCCTCTCGCTTCGACCATCGTTCAGACTCCGGACGACGCGATTGTGGCGGGCT
TCACCTCTATCCCTTCACAAGGGGATAACATGCCTGCTTACCATGCCAGACCAAGGCAAAGCGATGGCCCACTGCCAGTG
GTCATTGTAGTGCAGGAAATTTTTGGCGTGCATGAACATATCCGCGATATTTGTCGCCGTCTGGCGCTGGAGGGGTATCT
GGCTATCGCACCTGAACTTTACTTCCGCGAAGGCGATCCGAATGATTTTGCCGATATCCCTACGCTGCTTAGCGGTCTGG
TAGCAAAAGTGCCTGACTCGCAGGTGCTGGCCGATCTCGATCATGTCGCCAGTTGGGCGTCACGCAACGGCGGCGATGTT
CATCGCTTAATGATCACCGGATTTTGCTGGGGTGGACGTATCACCTGGCTGTATGCCGCGCATAATCCACAGCTAAAAGC
CGCAGTGGCGTGGTACGGCAAACTGACGGGCGATAAGTCGCTGAATTCACCGAAACAACCTGTTGATATCGCAACCGATC
TTAACGCGCCGGTTCTCGGCTTATATGGCGGCCAGGATAACAGCATTCCGCAAGAGAGTGTGGAAACGATGCGCCAGGCG
CTGCGGGCAGCAAACGCGAAAGCAGAGATTATCGTGTACCCGGATGCCGGGCATGCGTTCAACGCCGATTATCGTCCGAG
CTATCATGCCGAGTCTGCGAAAGACGGCTGGCAGCGAATGTTGGAATGGTTTAAGCAGTATGGAGGGAAGCGGAGTTAG

Upstream 100 bases:

>100_bases
CAAATGCGTTGCATAAATTTACCCATCAAAAGTGATGCAAATCACATAAATCACTCTTCATTCTGCAGGACTGCATAAAA
GATGAGCCGATTCAGGCAAT

Downstream 100 bases:

>100_bases
TTTCCTCTTAGTCTATATTTGAGATGGTGAGTGAACGAGTGCGTTTTGCTGCCATCTCTGTCCCCCAAAAAATAATCAGT
ATGAATTGATTGGAGATTAC

Product: putative hydrolase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPAYHARPRQSDGPLPV
VIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDV
HRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS

Sequences:

>Translated_292_residues
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPAYHARPRQSDGPLPV
VIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDV
HRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS
>Mature_292_residues
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPAYHARPRQSDGPLPV
VIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDV
HRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=270, Percent_Identity=98.1481481481482, Blast_Score=553, Evalue=1e-159,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 31924; Mature: 31924

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQ
CHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEECHHHCCCC
GDNMPAYHARPRQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCEEECCCC
NDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEEEEE
HNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
CCCCCEEHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS
HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQ
CHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEECHHHCCCC
GDNMPAYHARPRQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCEEECCCC
NDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEEEEE
HNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
CCCCCEEHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS
HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]