| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is gutQ
Identifier: 218701198
GI number: 218701198
Start: 3000265
End: 3001230
Strand: Direct
Name: gutQ
Synonym: ECIAI39_2894
Alternate gene names: 218701198
Gene position: 3000265-3001230 (Clockwise)
Preceding gene: 218701197
Following gene: 218701200
Centisome position: 58.46
GC content: 57.14
Gene sequence:
>966_bases ATGAGTGAAGCACTACTGAACGCGGGACGTCAGACGTTAATGCTGGAGTTACAGGAAGCAAGCCGTTTACCGGAACGTCT GGGCGATGATTTTGTTCGCGCCGCCAATATCATCCTGCACTGCGAAGGCAAAGTGGTGGTTTCGGGAATTGGCAAATCGG GCCACATTGGTAAGAAAATCGCCGCAACGCTTGCCAGCACCGGCACTCCTGCCTTTTTTGTCCATCCGGCAGAGGCATTG CACGGCGACCTGGGGATGATCGAAAGCCGCGATGTGATGCTGTTTATCTCTTACTCCGGTGGCGCGAAGGAACTGGATCT GATTATTCCGCGTCTGGAAGATAAATCTATCGCGCTGCTGGCGATGACCGGCAAACCGACGTCACCGCTGGGCCTGGCGG CGAAAGCGGTGCTGGATATCTCCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCACCGTCAATACC CTGATGATGGGTGACGCGCTGGCGATGGCGGTCATGCAGGCGCGCGGATTTAATGAAGAAGATTTTGCCCGCTCCCACCC AGCCGGGGCACTGGGCGCTCGCTTGCTGAATAAAGTGCATCATCTGATGCGCCGTGATGACGCTATTCCGCAGGTAGCGT TAACCGCCAGCGTGATGGATGCGATGCTGGAACTCAGCCGCACCGGTCTGGGGCTGGTGGCGGTATGTGACGCTCAGCAA CAGGTACAAGGCGTCTTTACCGACGGTGATTTACGTCGCTGGCTGGTTGGCGGCGGCGCACTCACCACGCCAGTCAATGA AGCGATGACGGTCGGCGGCACCACGTTGCAATCGCAAAGCCGTGCCATCGACGCCAAAGAAATCCTGATGAAACGCAAAA TCACCGCCGCACCGGTAGTGGATGAAAACGGCAAACTCACCGGCGCAATTAACCTGCAGGATTTCTATCAGGCCGGGATT ATTTAA
Upstream 100 bases:
>100_bases GAAAGCGTCGATAAGCTAATTACCGACGCAGGTATCGATCCGGCGTTTCGTCAGGCGCTGGAAAAGAAAGGGATCGATGT GATCATAACCGGAGAGAGCA
Downstream 100 bases:
>100_bases TCCTTCAGCCCCAGACGTTTCGCCAACCGATGCAAGTTGGCGACGTCGGTTTCCAGCATCCGTGCGCTGGCAGCCCAGTT GTGATGATTTTGTGCCTGTG
Product: D-arabinose 5-phosphate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ QVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI I
Sequences:
>Translated_321_residues MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ QVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI I >Mature_320_residues SEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALH GDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTL MMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQ VQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII
Specific function: Not Known. [C]
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain
Homologues:
Organism=Escherichia coli, GI87082151, Length=321, Percent_Identity=100, Blast_Score=651, Evalue=0.0, Organism=Escherichia coli, GI1789588, Length=316, Percent_Identity=45.5696202531646, Blast_Score=282, Evalue=2e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GUTQ_ECOLI (P17115)
Other databases:
- EMBL: U29579 - EMBL: U00096 - EMBL: AP009048 - EMBL: X51361 - RefSeq: AP_003275.1 - RefSeq: NP_417188.4 - ProteinModelPortal: P17115 - SMR: P17115 - STRING: P17115 - EnsemblBacteria: EBESCT00000000995 - EnsemblBacteria: EBESCT00000017893 - GeneID: 947587 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW5431 - KEGG: eco:b2708 - EchoBASE: EB0966 - EcoGene: EG10973 - eggNOG: COG0794 - GeneTree: EBGT00050000009485 - HOGENOM: HBG754974 - OMA: VHHLMRT - ProtClustDB: PRK11543 - BioCyc: EcoCyc:EG10973-MONOMER - BioCyc: MetaCyc:EG10973-MONOMER - Genevestigator: P17115 - InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR004800 - InterPro: IPR001347 - Gene3D: G3DSA:3.20.20.70 - SMART: SM00116 - TIGRFAMs: TIGR00393
Pfam domain/function: PF00571 CBS; PF01380 SIS
EC number: NA
Molecular weight: Translated: 34032; Mature: 33901
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS51371 CBS; PS51464 SIS; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI CCCHHHHCCCHHEEEEHHHHHCCHHHHCHHHHHHCCEEEEECCEEEEEECCCCCCCHHHH AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL HHHHHCCCCCEEEECCHHHHCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCEEEE AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE EECCCCCCCHHHHHHHHEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHH DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH QVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVV HHCEECCCCCCEEEEECCCCCCCCCHHHEECCCCEECCHHHCCCHHHHHHHHCCCCCCEE DENGKLTGAINLQDFYQAGII CCCCCEEEEEEHHHHHHHCCC >Mature Secondary Structure SEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI CCHHHHCCCHHEEEEHHHHHCCHHHHCHHHHHHCCEEEEECCEEEEEECCCCCCCHHHH AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL HHHHHCCCCCEEEECCHHHHCCCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCEEEE AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE EECCCCCCCHHHHHHHHEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHH DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH QVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVV HHCEECCCCCCEEEEECCCCCCCCCHHHEECCCCEECCHHHCCCHHHHHHHHCCCCCCEE DENGKLTGAINLQDFYQAGII CCCCCEEEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2134185