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The map label for this gene is yphB

Identifier: 218701056

GI number: 218701056

Start: 2848450

End: 2849322

Strand: Reverse

Name: yphB

Synonym: ECIAI39_2747

Alternate gene names: 218701056

Gene position: 2849322-2848450 (Counterclockwise)

Preceding gene: 218701057

Following gene: 218701047

Centisome position: 55.52

GC content: 54.64

Gene sequence:

>873_bases
ATGACCATCTATACCTTATCTCACGGGCCGCTAAAGCTGGACGTTTCTGATCAGGGCGGCGTAATCGAAGGCTTCTGGCG
CGATACGACGCCGCTGCTACGTCCTGGTAAAAAAAGCGGTGTGGCAACCGATGCCTCTTGTTTTCCGCTGGTACCATTTG
CAAACCGGGTGAGCGGCAACCGTTTTGTCTGGCAGGGGCGTGAGTATCAACTGCAACCGAATGTTGAGTGGGATGCGCAT
TATCTACACGGCGATGGCTGGTTGGGCGAGTGGCAATGTGTCTCGCGCAGCGATGATAGCTTGTGTCTGGTGTATGAACA
TCTCAGCGGTGTTTATCACTATCGGGTAAGCCAGGCATTTCATTTAACGGCGGATACGCTGACGGTGACGCTCGCTGTCA
CCAATCAAGGGGCAGAGACGCTGCCATTTGGTACCGGCTGGCATCCTTATTTTCCGTTGTCGCCGCAAACGCGGATTCAG
GCACAGGCGAGCGGTTACTGGCTGGAGCGGGAGCAGTGGCTGGCGGGTGAATTTTGCGAGCAGCTACCGCAGGAACTGGA
TTTTAACCAGCTCACGCCGTTGCCGCGCCAGTGGGTAAACAATGGTTTTGCCGGATGGAATGGTAAGGCCCGCATCGAGC
AGCCGCAGGAGGGTTATGCCATCATCATGGAAACGACGCCACCTGCACCGTGTTATTTCATCTTTGTTTCAGACCCGGCG
TTTGATAAAGGATATGCGTTTGATTTCTTCTGTCTGGAACCGATGAGCCATGCGCCGGATGACCATCATCGCCCGGAAGG
TGGTGACCTCATTGCGCTTGCACCAGGGGAATCAACAACTTCAGAGATGTCGTTGCGGGTTGCGTTACTGTAA

Upstream 100 bases:

>100_bases
ACCGTTTCTCGCTGGAACAGGCGGGAGATGCTTATGCACTGATGGCAAGCGGCAAATGTGGGAAAGTTGTGATTAATTTC
CCGGATTAAGGAGTCTGCGG

Downstream 100 bases:

>100_bases
TTTATAAAATGCCGGATAAGGCGTTTCTGAACTGAACCCCAAAACTTGGACAGTTTCAGTTAACCGGCTTTTTGATACTC
AGTCCGGTATTCTACCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAH
YLHGDGWLGEWQCVSRSDDSLCLVYEHLSGVYHYRVSQAFHLTADTLTVTLAVTNQGAETLPFGTGWHPYFPLSPQTRIQ
AQASGYWLEREQWLAGEFCEQLPQELDFNQLTPLPRQWVNNGFAGWNGKARIEQPQEGYAIIMETTPPAPCYFIFVSDPA
FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVALL

Sequences:

>Translated_290_residues
MTIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAH
YLHGDGWLGEWQCVSRSDDSLCLVYEHLSGVYHYRVSQAFHLTADTLTVTLAVTNQGAETLPFGTGWHPYFPLSPQTRIQ
AQASGYWLEREQWLAGEFCEQLPQELDFNQLTPLPRQWVNNGFAGWNGKARIEQPQEGYAIIMETTPPAPCYFIFVSDPA
FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVALL
>Mature_289_residues
TIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHY
LHGDGWLGEWQCVSRSDDSLCLVYEHLSGVYHYRVSQAFHLTADTLTVTLAVTNQGAETLPFGTGWHPYFPLSPQTRIQA
QASGYWLEREQWLAGEFCEQLPQELDFNQLTPLPRQWVNNGFAGWNGKARIEQPQEGYAIIMETTPPAPCYFIFVSDPAF
DKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVALL

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=290, Percent_Identity=96.8965517241379, Blast_Score=584, Evalue=1e-168,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 32602; Mature: 32471

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGN
CEEEEECCCCEEEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCEECCCCHHCCCCC
RFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSRSDDSLCLVYEHLSGVYHYRVSQAF
EEEECCCEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEHHCCEEEEEECEEE
HLTADTLTVTLAVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCE
EEEECEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHH
QLPQELDFNQLTPLPRQWVNNGFAGWNGKARIEQPQEGYAIIMETTPPAPCYFIFVSDPA
HHHHHCCCCCCCCCCHHHHCCCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEEEECCCC
FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVALL
CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGN
EEEEECCCCEEEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCEECCCCHHCCCCC
RFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSRSDDSLCLVYEHLSGVYHYRVSQAF
EEEECCCEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEHHCCEEEEEECEEE
HLTADTLTVTLAVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCE
EEEECEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHH
QLPQELDFNQLTPLPRQWVNNGFAGWNGKARIEQPQEGYAIIMETTPPAPCYFIFVSDPA
HHHHHCCCCCCCCCCHHHHCCCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEEEECCCC
FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVALL
CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]