| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is 218700967
Identifier: 218700967
GI number: 218700967
Start: 2751887
End: 2752516
Strand: Reverse
Name: 218700967
Synonym: ECIAI39_2655
Alternate gene names: NA
Gene position: 2752516-2751887 (Counterclockwise)
Preceding gene: 218700968
Following gene: 218700966
Centisome position: 53.63
GC content: 54.92
Gene sequence:
>630_bases ATGGAGATTAAACAATTCCAGCGAGCTGCTGGTATCAGCGAGGCACTGGCCGCACGCTGGTTCTCGCATATAACTTCTGC GATGAAAGAGTTTGGTATCAGCAAAGCAGAAGATCAGGCAATGTTTATTGCTCAAGCCGGGCATGAGTCTGGGGGCTTCA CCAGGTTGCAGGAGAATTTCAACTACAGTGTCAGCGGACTGGCTAACTTCGTTCGGGCTGGGCGTCTCACTCAGGGGCAG GCTAATGCACTGGGGCGCCGTGCTGGTGAACCACCATTGCCACTTGAGCGCCAGCGCGCGATCGCAAATCTGGTATACAG CAAACGCATGGGGAACAATGCCCCTGGTGATGGCTGGAATTACCGAGGGCGCGGACTTATCCAGATTACCGGTTTGAATA ACTATCGTGATTGCGGAAACGGTCTGAAGGTTGACCTGCTGGAGAGCCCTGAACTGCTGGCGCAGGACGAATATGCGGCT CGTAGCGCGGCGTGGTTCTTCGTCAGCAAAGGCTGCATGAAGTATACCGGCGATATTGCACGTGTAACTCTGATTATCAA TGGTGGCCGGAACGGCATCGACGACCGGCGAGCGCGGTACATCACTGCCAGTAAGGTGCTGGCGGTATGA
Upstream 100 bases:
>100_bases GTGGATTTATCTGAGGTCATTATCAACGCTGTCATGCTGGCTGCGGTTATTAAAACGCGCGGTAACGTCGTTCAAATTTT TAAAGTATCGAGGTCTAAAC
Downstream 100 bases:
>100_bases TCTGGGCATTCGTAAAAGCATACTGGAAACAGTTTCTTATCGTGGCAGTGCTTGCTGTTCTGGTCATATCAGGAGTGGTT GCCTGGAATATACACGGCAG
Product: putative phage endolysin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MEIKQFQRAAGISEALAARWFSHITSAMKEFGISKAEDQAMFIAQAGHESGGFTRLQENFNYSVSGLANFVRAGRLTQGQ ANALGRRAGEPPLPLERQRAIANLVYSKRMGNNAPGDGWNYRGRGLIQITGLNNYRDCGNGLKVDLLESPELLAQDEYAA RSAAWFFVSKGCMKYTGDIARVTLIINGGRNGIDDRRARYITASKVLAV
Sequences:
>Translated_209_residues MEIKQFQRAAGISEALAARWFSHITSAMKEFGISKAEDQAMFIAQAGHESGGFTRLQENFNYSVSGLANFVRAGRLTQGQ ANALGRRAGEPPLPLERQRAIANLVYSKRMGNNAPGDGWNYRGRGLIQITGLNNYRDCGNGLKVDLLESPELLAQDEYAA RSAAWFFVSKGCMKYTGDIARVTLIINGGRNGIDDRRARYITASKVLAV >Mature_209_residues MEIKQFQRAAGISEALAARWFSHITSAMKEFGISKAEDQAMFIAQAGHESGGFTRLQENFNYSVSGLANFVRAGRLTQGQ ANALGRRAGEPPLPLERQRAIANLVYSKRMGNNAPGDGWNYRGRGLIQITGLNNYRDCGNGLKVDLLESPELLAQDEYAA RSAAWFFVSKGCMKYTGDIARVTLIINGGRNGIDDRRARYITASKVLAV
Specific function: Unknown
COG id: COG3179
COG function: function code R; Predicted chitinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage D29 and phage L5 gp10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000726 [H]
Pfam domain/function: PF00182 Glyco_hydro_19 [H]
EC number: NA
Molecular weight: Translated: 22936; Mature: 22936
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKQFQRAAGISEALAARWFSHITSAMKEFGISKAEDQAMFIAQAGHESGGFTRLQENF CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCC NYSVSGLANFVRAGRLTQGQANALGRRAGEPPLPLERQRAIANLVYSKRMGNNAPGDGWN CCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC YRGRGLIQITGLNNYRDCGNGLKVDLLESPELLAQDEYAARSAAWFFVSKGCMKYTGDIA CCCCEEEEEECCCCHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHCCHHHHCCCEE RVTLIINGGRNGIDDRRARYITASKVLAV EEEEEEECCCCCCCHHHHHEEHHHHHCCC >Mature Secondary Structure MEIKQFQRAAGISEALAARWFSHITSAMKEFGISKAEDQAMFIAQAGHESGGFTRLQENF CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCC NYSVSGLANFVRAGRLTQGQANALGRRAGEPPLPLERQRAIANLVYSKRMGNNAPGDGWN CCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC YRGRGLIQITGLNNYRDCGNGLKVDLLESPELLAQDEYAARSAAWFFVSKGCMKYTGDIA CCCCEEEEEECCCCHHHHCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHCCHHHHCCCEE RVTLIINGGRNGIDDRRARYITASKVLAV EEEEEEECCCCCCCHHHHHEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]