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The map label for this gene is yfdX

Identifier: 218700843

GI number: 218700843

Start: 2615567

End: 2616199

Strand: Reverse

Name: yfdX

Synonym: ECIAI39_2518

Alternate gene names: 218700843

Gene position: 2616199-2615567 (Counterclockwise)

Preceding gene: 218700845

Following gene: 218700842

Centisome position: 50.98

GC content: 45.81

Gene sequence:

>633_bases
ATGAAACGTTTAATTATGGCTACGATGGTCACAGCAGTTCTGGTATCTTCAACTGTATGGGCTGCTGATAATGCACCGGT
AGCGGCACAACAGCAAACTCAGCAAGTTAAGCAAACCCAGAAAACGACAGCAGCAGAGCGTATCTCTGAACAAGGTTTAT
ATGCGATGCGTGACGTGCAGGTAGCGCGCCTGGCTCTGTTTCATGGCGATCCGGAAAAGGCAAAAGAACTGACCAATGAA
GCTTCCGCTTTGTTGTCAGATGACAGTACCGAATGGGCAAAGTTCGCAAAGCCAGGTAAAAAGACCAATGTCAATGATGA
CCAATATATTGTCATTAATGCATCTGTCGGAATTTCTGAGAGTTATGTAGCGACACCCGAAAAAGAAGCCGCGATAAAAA
TTGCCAACGAAAAAATGGCGAAAGGGGATAAAAAGGGCGCAATGGAAGAGCTTCGCCTGGCCGGTGTTGGTGTAATGGAA
AACCAATATCTGATGCCGCTTAAACAGACTCGTAATGCACTTGCTGATGCGCAGAAACTGCTTGATAAAAAGCAATACTA
CGAGGCAAACCTGGCGCTTAAAGGTGCGGAAGATGGAATCATCGTCGATAGCGAAGCACTGTTTGTGAACTAA

Upstream 100 bases:

>100_bases
GATAACCCTTTCAAAATGACCGTTGCTCTCTGATTTCTCATTTCATGCTCACCCAATATGATGGCGGCGTTTTCTAAAAC
TGTTAAAGAATGAGGTAAGT

Downstream 100 bases:

>100_bases
AGCTGACAGGCAATATATTGAGGTAAAGGATTTTACCCCTCCAGCCGACAATTTTTTATGGCCACAATACGACAGGTTGT
GGCCATAAAATTATTTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKRLIMATMVTAVLVSSTVWAADNAPVAAQQQTQQVKQTQKTTAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNE
ASALLSDDSTEWAKFAKPGKKTNVNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN

Sequences:

>Translated_210_residues
MKRLIMATMVTAVLVSSTVWAADNAPVAAQQQTQQVKQTQKTTAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNE
ASALLSDDSTEWAKFAKPGKKTNVNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN
>Mature_210_residues
MKRLIMATMVTAVLVSSTVWAADNAPVAAQQQTQQVKQTQKTTAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNE
ASALLSDDSTEWAKFAKPGKKTNVNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788719, Length=211, Percent_Identity=97.1563981042654, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021236 [H]

Pfam domain/function: PF10938 YfdX [H]

EC number: NA

Molecular weight: Translated: 22936; Mature: 22936

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIMATMVTAVLVSSTVWAADNAPVAAQQQTQQVKQTQKTTAAERISEQGLYAMRDVQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNVNDDQYIVINASVGISE
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
SYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKL
CCCCCCCHHHHEEEHHHHHHCCCCCHHHHHHHHHCCCEECCCEECCHHHHHHHHHHHHHH
LDKKQYYEANLALKGAEDGIIVDSEALFVN
HHHHHHHHHCEEEECCCCCEEECCCEEEEC
>Mature Secondary Structure
MKRLIMATMVTAVLVSSTVWAADNAPVAAQQQTQQVKQTQKTTAAERISEQGLYAMRDVQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNVNDDQYIVINASVGISE
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
SYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKL
CCCCCCCHHHHEEEHHHHHHCCCCCHHHHHHHHHCCCEECCCEECCHHHHHHHHHHHHHH
LDKKQYYEANLALKGAEDGIIVDSEALFVN
HHHHHHHHHCEEEECCCCCEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]