| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is yfaV
Identifier: 218700719
GI number: 218700719
Start: 2476565
End: 2477854
Strand: Reverse
Name: yfaV
Synonym: ECIAI39_2390
Alternate gene names: 218700719
Gene position: 2477854-2476565 (Counterclockwise)
Preceding gene: 218700722
Following gene: 218700718
Centisome position: 48.28
GC content: 52.87
Gene sequence:
>1290_bases ATGAGCACCGCTTTGCTTGACGCCGTGGTGAAGAAAAACCGCGCGCGTTTAATTCCGTTTATGTTGGCGCTGTATGTGCT GGCGTTTCTCGACCGTTCGAATATTGGTTTTGCCAAACAGACCTACCAGATTGATACCGGGCTGAGTAATGAAGCTTATG CGCTGGGAGCAGGCATTTTCTTTGTGGTATACGCGTTTCTGGGGGTTCCGGCGAATCTTTTGATGCGCAAACTGGGGGCA AGAACCTGGATTGGTACGACAACACTGCTGTGGGGATTTCTTTCGGCTGCCATGGCATGGGCCGATACTGAAGCGAAATT TCTGATTGTTCGCACTCTGCTTGGTGCTGCGGAGGCTGGGTTTTTCCCTGGTATGATTTATCTCACCTCGCAATGGTTTC CGCAGCGTAATCGAGCCAGCATTATGGGGCTGTTCTATATGGGCGCACCGCTGGCGTTAACAATGGGATCACCGCTTTCT GGCGCGCTGCTGGAGATGCATGGATTTATGGGGCATCCCGGCTGGTTCTGGATGTTTGTTATTGAAGGATTGTTGGCAGT CGGCGCTGGGGTATTCACATTCTTTTGGCTTGATGACACACCGGAGCAGGCACGTTTTCTGAGTAAACAAGAAAAAACGT TGCTTATCAATCAACTGGCAAGTGAAGAACAACAGAAAGTGACTTCTCGATTGAGCGATGCGCTGCGTAATGGCCGAGTC TGGCAACTGGCGATTATCTACCTGACCATTCAGGTAGCGGTTTACGGATTAATTTTCTTCCTGCCGACCCAGGTTGCTGC ATTGCTGGGGACAAAAGTGGGCTTTACGGCGTCGGTGGTCACCGCCATTCCGTGGGTTGCGGCCTTGTTTGGAACCTGGC TTATTCCGCGCTATTCCGATAAAACCGGCGAACGGCGTAATGTCGCAGCGCTGACATTACTGGCGGCGGGCATTGGTATT GGTCTGTCCGGGCTGCTTTCTCCAGTACTGGCGATCGTAGCGCTGTGTGTTGCAGCCATCGGGTTTATTGCCGTGCAGCC GGTGTTCTGGACGATGCCGACACAACTGCTTTCCGGTACGGCGCTGGCTGCGGGGATTGGTTTTGTAAACCTGTTTGGTG CAGTGGGCGGGTTTATTGCCCCGATCCTGCGCGTGAAAGCAGAAACGTTATTTTCCAGCGATGCGGCGGGATTACTGACG CTGGCAGCGGTGGCGGTCATCGGTTCGCTGATTATTTTCACTCTGCGTGTAAATCGCACTGTTGCGCAGACCGACGTGGC ACATCATTAA
Upstream 100 bases:
>100_bases AACTCAATCGTGACTGCAATTTGAAACGCCCCTACAGCCACTAATCACTCCGGGCGTTGCTGTGACAACGGTAACGCCCA CATATTCTAAGGAGCTTTTT
Downstream 100 bases:
>100_bases ATAGGTTAAGGAACACGATGAACGCATTATTAAGCAATCCCTTTAAAGAACGTTTACGCAAGGGCGAAGTGCAAATTGGT CTGTGGTTAAGCTCGACTAC
Product: putative carboxylate transporter; phthalate permease family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSTALLDAVVKKNRARLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGA RTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTMGSPLS GALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVTSRLSDALRNGRV WQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGI GLSGLLSPVLAIVALCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFSSDAAGLLT LAAVAVIGSLIIFTLRVNRTVAQTDVAHH
Sequences:
>Translated_429_residues MSTALLDAVVKKNRARLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGA RTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTMGSPLS GALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVTSRLSDALRNGRV WQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGI GLSGLLSPVLAIVALCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFSSDAAGLLT LAAVAVIGSLIIFTLRVNRTVAQTDVAHH >Mature_428_residues STALLDAVVKKNRARLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGAR TWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTMGSPLSG ALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVTSRLSDALRNGRVW QLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIG LSGLLSPVLAIVALCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFSSDAAGLLTL AAVAVIGSLIIFTLRVNRTVAQTDVAHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI6912666, Length=423, Percent_Identity=25.0591016548463, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI87082071, Length=429, Percent_Identity=98.8344988344988, Blast_Score=840, Evalue=0.0, Organism=Escherichia coli, GI2367193, Length=433, Percent_Identity=23.5565819861432, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI87082320, Length=420, Percent_Identity=21.6666666666667, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1789152, Length=415, Percent_Identity=22.4096385542169, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI2367379, Length=268, Percent_Identity=22.0149253731343, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71991453, Length=335, Percent_Identity=25.6716417910448, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71991448, Length=335, Percent_Identity=25.6716417910448, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322025, Length=219, Percent_Identity=26.027397260274, Blast_Score=97, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6323032, Length=222, Percent_Identity=29.2792792792793, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6321698, Length=281, Percent_Identity=24.5551601423488, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6322612, Length=272, Percent_Identity=22.4264705882353, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI20130167, Length=255, Percent_Identity=27.4509803921569, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46183; Mature: 46052
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTALLDAVVKKNRARLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIF CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCHHHHHHHHH FVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAG HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC FFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTMGSPLSGALLEMHGFMGHPGWFWMFV CCCCHHEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHH IEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVTSRLSDALRNGRV HHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KTGERRNVAALTLLAAGIGIGLSGLLSPVLAIVALCVAAIGFIAVQPVFWTMPTQLLSGT CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ALAAGIGFVNLFGAVGGFIAPILRVKAETLFSSDAAGLLTLAAVAVIGSLIIFTLRVNRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH VAQTDVAHH HHHHHCCCC >Mature Secondary Structure STALLDAVVKKNRARLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIF CHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCHHHHHHHHH FVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAG HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC FFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTMGSPLSGALLEMHGFMGHPGWFWMFV CCCCHHEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHH IEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVTSRLSDALRNGRV HHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC KTGERRNVAALTLLAAGIGIGLSGLLSPVLAIVALCVAAIGFIAVQPVFWTMPTQLLSGT CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ALAAGIGFVNLFGAVGGFIAPILRVKAETLFSSDAAGLLTLAAVAVIGSLIIFTLRVNRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH VAQTDVAHH HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]