Definition Escherichia coli IAI39 chromosome, complete genome.
Accession NC_011750
Length 5,132,068

Click here to switch to the map view.

The map label for this gene is yfaA

Identifier: 218700697

GI number: 218700697

Start: 2447047

End: 2448735

Strand: Reverse

Name: yfaA

Synonym: ECIAI39_2368

Alternate gene names: 218700697

Gene position: 2448735-2447047 (Counterclockwise)

Preceding gene: 218700698

Following gene: 218700696

Centisome position: 47.71

GC content: 50.68

Gene sequence:

>1689_bases
ATGAGTGGTGAAAAAAAGGCGAAAGGCTGGCGGTTCTATGGTCTTGTAGGTTTGGGCGCAATAGTACTGCTTTCCGCTGG
CGTCTGGGCGTTGCAATATGCTGGCAGTGGGCCAGAAAAAACGTTGTCGCCGCTGGTGGTGCACAACAATCTGCAAATCG
ATCTCAATGAGCCGGACCTCTTTCTCGACAGCGACTCTCTGAGCCAGCTTCCCAAAGACCTCCTTACCATTCCGTTTCTC
CACGATGTTCTGAGTGAAGATTTCGTTTTCTATTATCAGAATCATGCCGATCGTCTGGGCATTGAAGGCAGCATTCGCCG
CATTGTCTACGAACACGATCTCACACTAAAAGATAAGCTCTTTTCGTCACTCTTAGATCAGCCCGCGCAGGCGGCGCTAT
GGCACGATAAACAAGGCCATCTTTCTCATTATATGGTGCTGATCCAGCGAAGTGGTTTAAGCAAGCTGCTGGAGCCATTG
CTGTTTGCCGCTACCAGCGACAGCCAGTTAAGTAAAACGGAAATCAGTAGTATTAAGCTAAATAGTGAAACTATTCCTGT
TTATCAGTTGCGCTATAACGGCAATAACGCCCTGATGTTCGCGACATATCAGGATAAGATGCTGGTATTTTCCAGCACGG
ATATGCTGTTTAAAGATGATCAGCAGGATACCGAAGCCACGGCGATCGCAAGTGATTTGTTGAGCGGTAAAAAACGCTGG
CAAGCCAGCTTTGGCCTGGAAGAGCGTGCTGCTGAAAAAACGCCAGTACGCCAGCGCATCGTGGTCAGCGCCAGGTTGCT
GGGGTTTGGCTACCAGCGATTAATGCCTTCTTTTGCTGGCGTACGCTTCGAAATGAGCAACGACGGCTGGCACAGTTTTC
TGGCGTTAAATGATGAATCCGCAAGCGTAGATGCCAGTTTCGATTTTACGCCGGTATGGAACAGTATGCCTGCAGGGGCC
AGCTTCTGTGTGGCGGTGCCTTATTCACATGGTATTGCTGAAGAGATGCTTTCCCACATCAGCCAGGAAAACGACAAGCT
CAACGGGGCGTTAGACGGTGGCGCGGGGCTGTGCTGGTATGAAGATTCAAAATTGCAAACTCCGCTGTTTGTCGGTCAGT
TTGATGGTTCTGCCGAACAAGTGCAATTGCCAGGAAAACTGTTTACGCAAAATATTGGTGCGCACGAAAGCAAAGCGCCA
GAAGGTGTTTTGCCGGTAAACCAGACTCAGCAGGGCGAAGCGCAAATCTGGCGTCGCGAAGTGAGTTCCCGATACGGCCA
GTATCCGAAAGCGCAGGCGGCGCAACCCGATCAATTAATGTCGGATTATTTTTTCCGCGTGTCGCTGGCGATGCAAAACA
AAACGCTGCTTTTCTCCCTCGATGACACGCTGGTCAATGACGCGCTGCAAACACTGAATAAAACCCGCCCGGCAATGGTG
GATGTGATACCCACTGACGGCATCGTTCCGCTCTATATCAATCCACAAGGCGTGGCGAAACTGCTGCGTAACGAAACGCT
GACCAGTTTGCCGAAGAATCTCGAACCGGTTTTTTATAACGCCGCACAAACTTTATTAATGCCGAAGCTGGACGCTTTAT
CTCAACAACCGCGTTATGTCATGAAGCTGGCACAGATGGAACCCGGTGCCGCCTGGCAGTGGCTACCCATAACCTGGCAG
CCGCTATGA

Upstream 100 bases:

>100_bases
AAAGTCCAGGCTGCAAAGTCTGGGCTTTTGTCGTATTAGGGCGCGGTAAAGTTTTGCTGTGCTCGTAAAAAATGGCTGGC
TTTACACAAGGAATGTGGCA

Downstream 100 bases:

>100_bases
GGCACGGACTGCTGGCGCTGATTTGCTGGCTGTGTTGTGTTGTTGCCCATAGCGAAATGCTGAATGTCGAACAATCCGGG
CTGTTTCGCGCGTGGTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSGEKKAKGWRFYGLVGLGAIVLLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFL
HDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPL
LFAATSDSQLSKTEISSIKLNSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIASDLLSGKKRW
QASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMSNDGWHSFLALNDESASVDASFDFTPVWNSMPAGA
SFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWYEDSKLQTPLFVGQFDGSAEQVQLPGKLFTQNIGAHESKAP
EGVLPVNQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNDALQTLNKTRPAMV
DVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQ
PL

Sequences:

>Translated_562_residues
MSGEKKAKGWRFYGLVGLGAIVLLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFL
HDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPL
LFAATSDSQLSKTEISSIKLNSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIASDLLSGKKRW
QASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMSNDGWHSFLALNDESASVDASFDFTPVWNSMPAGA
SFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWYEDSKLQTPLFVGQFDGSAEQVQLPGKLFTQNIGAHESKAP
EGVLPVNQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNDALQTLNKTRPAMV
DVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQ
PL
>Mature_561_residues
SGEKKAKGWRFYGLVGLGAIVLLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLH
DVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLL
FAATSDSQLSKTEISSIKLNSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIASDLLSGKKRWQ
ASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMSNDGWHSFLALNDESASVDASFDFTPVWNSMPAGAS
FCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWYEDSKLQTPLFVGQFDGSAEQVQLPGKLFTQNIGAHESKAPE
GVLPVNQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNDALQTLNKTRPAMVD
VIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQP
L

Specific function: Unknown

COG id: COG4685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082069, Length=562, Percent_Identity=97.3309608540925, Blast_Score=1132, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018671 [H]

Pfam domain/function: PF09909 DUF2138 [H]

EC number: NA

Molecular weight: Translated: 62665; Mature: 62534

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGEKKAKGWRFYGLVGLGAIVLLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDL
CCCCCCCCCEEEEEHHHHHHHHHHHCCHHEEEECCCCCCCCCCCEEEECCEEEEECCCCE
FLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKL
EECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHEEEEEECCCCHHHHH
FSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKL
HHHHHCCCHHHHHCCCCCCCHHHEEEEHHHCCHHHHHHHHHEECCCCCCCCHHECCEEEE
NSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIASDLLSGKKRW
CCCCCEEEEEEECCCCEEEEEEECCCEEEEECCCCEECCCCCHHHHHHHHHHHHCCHHHH
QASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMSNDGWHSFLALNDES
HHHCCCHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCCCCEEEEEECCCC
ASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWY
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEE
EDSKLQTPLFVGQFDGSAEQVQLPGKLFTQNIGAHESKAPEGVLPVNQTQQGEAQIWRRE
ECCCCCCCEEEEECCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNDALQTLNKTRPAMV
HHHHHCCCCCCCCCCHHHHHHHHHEEEEEEECCCEEEEEECHHHHHHHHHHHHCCCCCEE
DVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYV
EEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHCCCCHHH
MKLAQMEPGAAWQWLPITWQPL
HHHHHCCCCCCEEEECEEECCC
>Mature Secondary Structure 
SGEKKAKGWRFYGLVGLGAIVLLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDL
CCCCCCCCEEEEEHHHHHHHHHHHCCHHEEEECCCCCCCCCCCEEEECCEEEEECCCCE
FLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKL
EECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHEEEEEECCCCHHHHH
FSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKL
HHHHHCCCHHHHHCCCCCCCHHHEEEEHHHCCHHHHHHHHHEECCCCCCCCHHECCEEEE
NSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIASDLLSGKKRW
CCCCCEEEEEEECCCCEEEEEEECCCEEEEECCCCEECCCCCHHHHHHHHHHHHCCHHHH
QASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMSNDGWHSFLALNDES
HHHCCCHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCCCCEEEEEECCCC
ASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWY
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEE
EDSKLQTPLFVGQFDGSAEQVQLPGKLFTQNIGAHESKAPEGVLPVNQTQQGEAQIWRRE
ECCCCCCCEEEEECCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNDALQTLNKTRPAMV
HHHHHCCCCCCCCCCHHHHHHHHHEEEEEEECCCEEEEEECHHHHHHHHHHHHCCCCCEE
DVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYV
EEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHCCCCHHH
MKLAQMEPGAAWQWLPITWQPL
HHHHHCCCCCCEEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2834621 [H]