| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is yejO
Identifier: 218700661
GI number: 218700661
Start: 2400544
End: 2403054
Strand: Reverse
Name: yejO
Synonym: ECIAI39_2330
Alternate gene names: 218700661
Gene position: 2403054-2400544 (Counterclockwise)
Preceding gene: 218700663
Following gene: 218700658
Centisome position: 46.82
GC content: 48.83
Gene sequence:
>2511_bases TTGGCATCAACAGTTGAGTATGGTGAGACAGTTGATGGTGTTGTCCTGGAAAAAGATATCCAGCTGGTTTATGGGACCGC CAATAATACGAAAATCAATCCTGGCGGAGAACAGCATATTAAAGAATTTGGTATAAGTAGTAATACTGAAATTAACGGCG GGTATCAGTACATTGAAATGAATGGCACCGCAGAATACTCAGTATTAAATGATGGTTATCAAATTGTTCAAATGGGTGGC GCGGCAAACCAGACTACCCTCAATAATGGTGTGCTACAGGTTTATGGCGCGGCGAATGAACCTACGATTAAAGGCGGGCG CTTAATCGTTGAAAAAGATGGGGGAACCGTCTTTGCCGCTATCGAAAAGGGAGGACTACTGGAGGTTAAAGAGGGGGGAT TTGCGCTTGCGGTAGATCAGAAAGCAGGCGGTGCGATTAAAACAACCACGCGGGCCATGGAGGTATTCGGAACAAACCGT CTCGGTCAGTTCGATATCAAGAATGGTATTGCTAATAATATGTTGTTGGAAAACGGCGGAAGTTTGCGAGTTGAAGAAAA TGACTTCGCTTATAATACCACTGTGGATAATGGCGGCTTACTGGAGGTTATGGATGGCGGGACTGCAACTGGCGTTGATA AAAAAGCAGGCGGAAAATTAATTGTCTCAACGAATGCGCTGGAAGTGAGTGGTACAAACAGTAAAGGCCAATTTAGTATA AAGGATGGTGTGTCAAAAAATTATGAACTGGATGATGGTTCCGGGCTCATTGTTATGGAGGACACGCAGGCCATTGACAC TATCCTTGATGAGCATGCCACTATGCAATCGCTGGGAAAGGATACTGGTACGAGAGTGCAGGCAAATGCGGTGTATGATC TCGGTCGATCAGATCAGAATGGAAGTATCACGTATTCCTCTAAAGCCATCTCTGAAAATATGGTTATCAACAATGGCCGC GCTAATGTCTGGGCTGGCACAATGGTTAACGTTTCAGTCAGAGGGAATGATGGCATTCTTGAGGTCATGAAGCCGCAAAT AAATTATGCACCCGCTATGTTGGTGGGTAGTGTCGTGGTTTCTGAGGGCGCTTCTTTAAGAACGCATGGTGCCGTGGATA CCAGCAAAGCGGATGTTTCGCTCGATGGTAGCTCATGGACCATCATTGCCGATATCACTACGACGAACCAAAACACCCTC CTCAACTTAGCCAACCTTGCGATGTCTGACGCAAATGTGATTATGATGGCTGAGCCAGTGACTCGTTCATCAGTGACGGC AAGTGCGGAAAATTTCATTACGTTGACCACCAATACCCTGTCGGGAAACGGCAATTTTTATATGCGTACCGATATGGCTA ATCATCAGAGCGATCAGCTCAACGTCACCGGTCAGGCAACAGGTGATTTCAAAATATTCGTGACGGACACCGGTGCCAGC CCGGCTGCAGGAGATAGCCTTACACTGGTAACGACGGGCGGCGGTGATGCTGCATTCACGTTGGGCAATGCCGGAGGCGT TGTTGATATCGGTACGTATGAATATACCTTGCTGGATAATGGCAACCATAGCTGGAGTCTGGCAGAAAATCGCGCGCAAA TTACCCCTTCAACCACTGATGTGCTGAATATGGCGGCAGCACAACCGCTGGTATTTGATGCAGAACTGGACACCGTGCGT GAGCGTCTTGGTAGCGTAAAAGGCGTTAATTACGATACGGCGATGTGGAGTTCGGCAATTAACACCCGCAACAACGTGAC CACTGATGCGGGAGCTGGCTTTGAGCAAACATTGACGGGGCTGACGCTCGGTATCGATAGCCGTTTCTCCCGTGAAGAAA GCAGTACAATTCGCGGCTTGTTCTTTGGTTACTCTCATTCTGATATTGGTTTTGATCGCGGCGGCAAAGGCAATGTCGAT AGCTATACCCTGGGGGCTTATGCCGGTTGGGAGCATCAGAACGGTGCCTATGTTGATGGGGTGGTGAAAGTTGACCGTTT TGCCAACACCATCCATGGCAAGATGAGTAATGGGGCAACAGCGTTTGGCGATTACAATAGTAACGGCGCGGGTGCTCATG TCGAGAGCGGGTTCCGTTGGGTTGACGGATTGTGGAGTGTTAGACCTTATCTGGCCTTTACCGGCTTTACCACAGATGGT CAGGACTACACGTTATCAAACGGCATGCGCGCGGATGTGGGAAATACCCGCATATTACGGGCTGAAGCGGGAACGGCGGT AAGCTATCACATGGACCTGCAAAACGGTACGACGCTGGAACCCTGGCTGAAAGCCGCCGTACGTCAGGAATACGCCGATT CTAACCAGGTGAAAGTTAATGACGATGGCAAATTTAATAATGATGTGGCTGGAACCCGTGGCGTTTATCAGGCTGGGATA AGGTCATCGTTTACCCCGACGTTAAGCGGTCATTTGTCAGTCAGTTATGGCAATGGCGCAGGGGTAGAATCGCCGTGGAA TACTCAGGCGGGTGTGGTCTGGACGTTCTGA
Upstream 100 bases:
>100_bases TTCATAGGATGAAAGCTCAATGCATCAATCTGGTTCTGTTTCTCTTTGTCGTTCCGCAATATCTGTTCTGGTGGCTACAG CGTTATATTCACCCATAGCA
Downstream 100 bases:
>100_bases TAACAGAAAATAAACAGGCCGTGATGTGTCGCGGTCTGTTTATCGAATTAAATGCAGATATAAAAAAACCAACCGTAAAG GTTGGTTTTTTTGGGATTTT
Product: putative autotransporter outer membrane protein; type V secretion
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 836; Mature: 835
Protein sequence:
>836_residues MASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGISSNTEINGGYQYIEMNGTAEYSVLNDGYQIVQMGG AANQTTLNNGVLQVYGAANEPTIKGGRLIVEKDGGTVFAAIEKGGLLEVKEGGFALAVDQKAGGAIKTTTRAMEVFGTNR LGQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDNGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSI KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTRVQANAVYDLGRSDQNGSITYSSKAISENMVINNGR ANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGSVVVSEGASLRTHGAVDTSKADVSLDGSSWTIIADITTTNQNTL LNLANLAMSDANVIMMAEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGAS PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVR ERLGSVKGVNYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNVD SYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTRGVYQAGI RSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF
Sequences:
>Translated_836_residues MASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGISSNTEINGGYQYIEMNGTAEYSVLNDGYQIVQMGG AANQTTLNNGVLQVYGAANEPTIKGGRLIVEKDGGTVFAAIEKGGLLEVKEGGFALAVDQKAGGAIKTTTRAMEVFGTNR LGQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDNGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSI KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTRVQANAVYDLGRSDQNGSITYSSKAISENMVINNGR ANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGSVVVSEGASLRTHGAVDTSKADVSLDGSSWTIIADITTTNQNTL LNLANLAMSDANVIMMAEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGAS PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVR ERLGSVKGVNYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNVD SYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTRGVYQAGI RSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF >Mature_835_residues ASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGISSNTEINGGYQYIEMNGTAEYSVLNDGYQIVQMGGA ANQTTLNNGVLQVYGAANEPTIKGGRLIVEKDGGTVFAAIEKGGLLEVKEGGFALAVDQKAGGAIKTTTRAMEVFGTNRL GQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDNGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSIK DGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTRVQANAVYDLGRSDQNGSITYSSKAISENMVINNGRA NVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGSVVVSEGASLRTHGAVDTSKADVSLDGSSWTIIADITTTNQNTLL NLANLAMSDANVIMMAEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASP AAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVRE RLGSVKGVNYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNVDS YTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQ DYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTRGVYQAGIR SSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
Organism=Escherichia coli, GI87082145, Length=900, Percent_Identity=42, Blast_Score=630, Evalue=0.0, Organism=Escherichia coli, GI48994897, Length=561, Percent_Identity=30.6595365418895, Blast_Score=132, Evalue=9e-32, Organism=Escherichia coli, GI1787954, Length=429, Percent_Identity=28.6713286713287, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1787452, Length=648, Percent_Identity=23.9197530864198, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR006315 - InterPro: IPR012332 - InterPro: IPR011050 - InterPro: IPR004899 - InterPro: IPR003991 [H]
Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]
EC number: NA
Molecular weight: Translated: 88369; Mature: 88238
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGISSNTEINGGYQYIEM CCCCCCCCCCCCCEEEEECEEEEEECCCCCEECCCHHHHHHHHCCCCCCEECCCEEEEEE NGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGAANEPTIKGGRLIVEKDGGTVFAA CCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEE IEKGGLLEVKEGGFALAVDQKAGGAIKTTTRAMEVFGTNRLGQFDIKNGIANNMLLENGG ECCCCEEEEECCCEEEEEECCCCCEEEEHHHHHHHHCCCCCCCEECCCCCCCCEEEECCC SLRVEENDFAYNTTVDNGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSI EEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECEEEEECCCCCCEEEE KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTRVQANAVYDLGRSDQN CCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCC GSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGSVVV CCEEEECCCCCCCEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHC SEGASLRTHGAVDTSKADVSLDGSSWTIIADITTTNQNTLLNLANLAMSDANVIMMAEPV CCCCCEEECCCCCCCCCEEEECCCCEEEEEEEEECCCCCEEEEEHHEECCCCEEEEECCC TRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGAS CCCCEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCC PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTD CCCCCEEEEEEECCCCEEEEECCCCCEEEECCEEEEEEECCCCCEEEECCCEEECCCHHH VLNMAAAQPLVFDAELDTVRERLGSVKGVNYDTAMWSSAINTRNNVTTDAGAGFEQTLTG HHHHHHCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCE LTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNVDSYTLGAYAGWEHQNGAYVDG EEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE VVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG EEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCEEEEEEECCCC QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVN CCEEECCCCEECCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEC DDGKFNNDVAGTRGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure ASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGISSNTEINGGYQYIEM CCCCCCCCCCCCEEEEECEEEEEECCCCCEECCCHHHHHHHHCCCCCCEECCCEEEEEE NGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGAANEPTIKGGRLIVEKDGGTVFAA CCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEE IEKGGLLEVKEGGFALAVDQKAGGAIKTTTRAMEVFGTNRLGQFDIKNGIANNMLLENGG ECCCCEEEEECCCEEEEEECCCCCEEEEHHHHHHHHCCCCCCCEECCCCCCCCEEEECCC SLRVEENDFAYNTTVDNGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSI EEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECEEEEECCCCCCEEEE KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTRVQANAVYDLGRSDQN CCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCC GSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGSVVV CCEEEECCCCCCCEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHC SEGASLRTHGAVDTSKADVSLDGSSWTIIADITTTNQNTLLNLANLAMSDANVIMMAEPV CCCCCEEECCCCCCCCCEEEECCCCEEEEEEEEECCCCCEEEEEHHEECCCCEEEEECCC TRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGAS CCCCEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCC PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTD CCCCCEEEEEEECCCCEEEEECCCCCEEEECCEEEEEEECCCCCEEEECCCEEECCCHHH VLNMAAAQPLVFDAELDTVRERLGSVKGVNYDTAMWSSAINTRNNVTTDAGAGFEQTLTG HHHHHHCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCE LTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNVDSYTLGAYAGWEHQNGAYVDG EEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE VVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG EEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCEEEEEEECCCC QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVN CCEEECCCCEECCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEC DDGKFNNDVAGTRGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]