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The map label for this gene is ycaQ

Identifier: 218700565

GI number: 218700565

Start: 2283564

End: 2284796

Strand: Reverse

Name: ycaQ

Synonym: ECIAI39_2231

Alternate gene names: 218700565

Gene position: 2284796-2283564 (Counterclockwise)

Preceding gene: 218700566

Following gene: 218700564

Centisome position: 44.52

GC content: 52.47

Gene sequence:

>1233_bases
ATGTCGCTGCCGCACCTCTCTCTTGCTGATGCGCGTAATCTTCACCTCGCCGCGCAAGGCCTGTTAAACAAACCCCGCCG
TCGAGCGTCGTTGGAGGATATTCCGGCAACGATCTCCCGCATGTCCTTGCTGCAAATCGATACCATTAATATTGTTGCCC
GTAGCCCATATCTGGTGCTTTTCAGTCGTCTGGGAAATTATCCTGCCCAGTGGCTGGATGAGTCTCTGGCGCGTGGCGAA
TTAATGGAATACTGGGCGCATGAAGCCTGCTTTATGCCGCGTAGCGATTTTCGTCTTATTCGCCACCGCATGCTGGCACC
TGAAAAAATGGGCTGGAAATACAAAGACGCCTGGATGCAGGAACATGCGGCGGAAATTGCACAGTTAATTCAGCATATTC
ATGATAAGGGACCGGTACGTTCAGCCGATTTCGAGCATTCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCAT
AAACGGCATCTGGAAGGTTTATTTACAGCCGGGAAAGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTT
AACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATA
ACAGTGCGCGTAGCCTGGGCATATTCCGCGAACAGTGGCTGGCAGATTACTATCGGCTGAAACGTCCGGCACTGGCGGCT
TGGCGCGAAGCGAGGGCTGAACTGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGCTGA
TTTGCTGCCGCTACTCGAGCGTGCGCTCGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTG
TTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGAAACGC
CAGTATGGCTATTTTGTTCTGCCGTTATTACATCGTGGGCAATTAGTTGGGCGAATGGATGCCAAAATGCATCGCCAGAC
AGGCATCCTTGAAGTTATCTCTCTGTGGTTACAGGAAGGCATTAAACCAACGACAACGCTGCAAAAAGGGTTACGTCAGG
CGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGACGCTGCCCGCAAGGCCTCTTTACTGATTGC
CGCACCGGCTGGGAAATAGACCCCGTCGCATAA

Upstream 100 bases:

>100_bases
GCTTTCAGGTGATGAACCAGCGAAACTGCTTGCGCAACTAACCTCGCTGGCTTCTGGCAACTAGTTACGCCGCGGCAGCG
TTCGATTGATGGAGTCATGA

Downstream 100 bases:

>100_bases
ATGATTATGATAAGATTTATGCATTCATAACCCGATCCATCTGGAGGAACTATGGATCATCGTCTGCTTGAAATCATTGC
CTGCCCGGTTTGCAACGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGE
LMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQEHAAEIAQLIQHIHDKGPVRSADFEHSRKGASGWWEWKPH
KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA
WREARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKR
QYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDC
RTGWEIDPVA

Sequences:

>Translated_410_residues
MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGE
LMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQEHAAEIAQLIQHIHDKGPVRSADFEHSRKGASGWWEWKPH
KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA
WREARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKR
QYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDC
RTGWEIDPVA
>Mature_409_residues
SLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGEL
MEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQEHAAEIAQLIQHIHDKGPVRSADFEHSRKGASGWWEWKPHK
RHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAAW
REARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQ
YGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDCR
TGWEIDPVA

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=410, Percent_Identity=98.780487804878, Blast_Score=832, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 47582; Mature: 47451

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVL
CCCCCCCHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHEEEEEEEEECCHHHHH
FSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHH
EHAAEIAQLIQHIHDKGPVRSADFEHSRKGASGWWEWKPHKRHLEGLFTAGKVMVIERRN
HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC
FQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA
HHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHH
WREARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCHHH
AEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEG
HHHHHCCCEEEEEECCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
IKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDCRTGWEIDPVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVL
CCCCCCHHCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHEEEEEEEEECCHHHHH
FSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHH
EHAAEIAQLIQHIHDKGPVRSADFEHSRKGASGWWEWKPHKRHLEGLFTAGKVMVIERRN
HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC
FQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA
HHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHH
WREARAELQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCHHH
AEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEG
HHHHHCCCEEEEEECCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
IKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDCRTGWEIDPVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]