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The map label for this gene is ycgG

Identifier: 218700253

GI number: 218700253

Start: 1983860

End: 1985383

Strand: Reverse

Name: ycgG

Synonym: ECIAI39_1906

Alternate gene names: 218700253

Gene position: 1985383-1983860 (Counterclockwise)

Preceding gene: 218700256

Following gene: 218700252

Centisome position: 38.69

GC content: 45.21

Gene sequence:

>1524_bases
ATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATAACCGGTGTCGCTATTTTGAACATCCAGCTCTG
GTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCAC
AGGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCGACCTCGAGGAGCAATATCAGCTTGGCACTGAAGCAGCT
CTGAAACCTCACCTGCGCACAATCATCATTCTCAAACAGGGAACGGTTTGGTGTACATCCTTACCGGGGAATCGGGTCCT
GCTGTCTCGTATTCCTGTTTTCCCGGACAGTAATTTACTGTTGGCTCCGGCAATCGACACCGTTAATAGATTACCTATCC
TGCTCTATCAGAGCCAATTTGCAGATACGCGCATTTTGGTTACGATAAGTGATCAGCATATTCGCGGGGCGCTTAATGTA
CCCTTGAAAGGGGTAAGGTATGTATTACGCGTGGCGGATGACATTATTGGACCTACGGGTGATGTGATGACGCTTAATGG
ACATTATCCCTATACCGAGAAGGTTCACTCCACAAAATATCATTTCACTATTATCTTTAACCCGCCACCACTCTTTAGCT
TCTACAGACTTATCGATAAAGGCTTTGGGATATTGATATTTATTCTGTTAATCGCCTGCGCCGCTGCTTTGCTGCTTGAT
AGGTATTTCAATAAAAGCGCAACGCCTGAAGAGATCCTGCGACGGGCTATAAATAATGGGGAGATCGTCCCTTTTTACCA
ACCTGTGGTAAATGGTCGGGAAGGGACATTGCGGGGAGTTGAGGTGTTAGCCCGCTGGAAACAACCTCACGGTGGATATA
TATCACCCGCGGCATTTATTCCACTTGCTGAAAAATCCGGATTAATCGTTCCGCTTACGCAAAGCCTGATGAATCAGGTT
GCCAGACAGATGAACGCTATCTCGAGTAAACTGCCGGAAGGTTTTCATATTGGAATTAATTTTAGCGCCTCGCATATTAT
TTCGCCGACGTTTGTCGACGAGTGCTTAAATTACCGTGACAGTTTTACCCGCCGCGATTTAAACCTCGTTCTGGAAGTCA
CCGAGCGTGAGCCATTAAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATTCTGCATGAAAATGGTTTTGTCATCGCG
CTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTGCATGACCTGCATATTGATTATATCAAAATTGATCACAG
TTTCGTTGGCCGCGTCAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCTGGCGCGTAAACTTTCGA
TCAGTATCGTCGCTGAAGGTGTCGAAACGAAAGAACAACTTGATTATCTGAACCAAAATAATATCACATTTCAGCAGGGT
TATTATTTCTATAAACCTGTTACATACATCGACCTGGTTAAAATTATCCTTTCTAAACCGAAGGTGAAGGTTGTGGTTGA
GTGA

Upstream 100 bases:

>100_bases
GTGGATATTTGTGATGCTCTCTACCATGCTCTCTGTAGACGCCAGCGCGAGCGAATGAACGTCATTTTCATGTATTAAAC
CCTTTGTTCGGGACAAGCGA

Downstream 100 bases:

>100_bases
AAATTGATCAGTAAGGCCATGGTGCGGTGTAATTATAGACAGCTAATTAGCTCGTTGCCTCTTGTTACTATTGTTCATTA
TTTTGTTTGCTATAATTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECDLEEQYQLGTEAA
LKPHLRTIIILKQGTVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAALLLD
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQV
ARQMNAISSKLPEGFHIGINFSASHIISPTFVDECLNYRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIA
LDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
YYFYKPVTYIDLVKIILSKPKVKVVVE

Sequences:

>Translated_507_residues
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECDLEEQYQLGTEAA
LKPHLRTIIILKQGTVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAALLLD
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQV
ARQMNAISSKLPEGFHIGINFSASHIISPTFVDECLNYRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIA
LDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
YYFYKPVTYIDLVKIILSKPKVKVVVE
>Mature_507_residues
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECDLEEQYQLGTEAA
LKPHLRTIIILKQGTVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAALLLD
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQV
ARQMNAISSKLPEGFHIGINFSASHIISPTFVDECLNYRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIA
LDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
YYFYKPVTYIDLVKIILSKPKVKVVVE

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=507, Percent_Identity=98.6193293885602, Blast_Score=1024, Evalue=0.0,
Organism=Escherichia coli, GI1786507, Length=248, Percent_Identity=44.758064516129, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1788502, Length=252, Percent_Identity=39.2857142857143, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI87081980, Length=524, Percent_Identity=27.6717557251908, Blast_Score=167, Evalue=2e-42,
Organism=Escherichia coli, GI87081743, Length=293, Percent_Identity=34.1296928327645, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI87081921, Length=235, Percent_Identity=34.468085106383, Blast_Score=148, Evalue=7e-37,
Organism=Escherichia coli, GI1790496, Length=279, Percent_Identity=31.8996415770609, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787541, Length=235, Percent_Identity=34.0425531914894, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI226510982, Length=250, Percent_Identity=31.2, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787055, Length=239, Percent_Identity=29.7071129707113, Blast_Score=108, Evalue=8e-25,
Organism=Escherichia coli, GI87082096, Length=235, Percent_Identity=29.7872340425532, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1788849, Length=258, Percent_Identity=28.6821705426357, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 56818; Mature: 56818

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAV
CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NIAGKECDLEEQYQLGTEAALKPHLRTIIILKQGTVWCTSLPGNRVLLSRIPVFPDSNLL
HHCCCCCCCHHHHHCCCHHHCCCCEEEEEEEECCCEEEECCCCCEEEEEECCCCCCCCEE
LAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNVPLKGVRYVLRVADDIIGPTG
EECCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAALLLD
CEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFI
HHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHEE
PLAEKSGLIVPLTQSLMNQVARQMNAISSKLPEGFHIGINFSASHIISPTFVDECLNYRD
EECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHHH
SFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHID
HHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCEE
YIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
EEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCEEEECC
YYFYKPVTYIDLVKIILSKPKVKVVVE
EEEECCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAV
CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NIAGKECDLEEQYQLGTEAALKPHLRTIIILKQGTVWCTSLPGNRVLLSRIPVFPDSNLL
HHCCCCCCCHHHHHCCCHHHCCCCEEEEEEEECCCEEEECCCCCEEEEEECCCCCCCCEE
LAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNVPLKGVRYVLRVADDIIGPTG
EECCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAALLLD
CEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFI
HHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHEE
PLAEKSGLIVPLTQSLMNQVARQMNAISSKLPEGFHIGINFSASHIISPTFVDECLNYRD
EECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHHH
SFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHID
HHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCEE
YIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
EEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCEEEECC
YYFYKPVTYIDLVKIILSKPKVKVVVE
EEEECCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]