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The map label for this gene is ydeI

Identifier: 218700191

GI number: 218700191

Start: 1921935

End: 1922327

Strand: Reverse

Name: ydeI

Synonym: ECIAI39_1840

Alternate gene names: 218700191

Gene position: 1922327-1921935 (Counterclockwise)

Preceding gene: 218700192

Following gene: 218700190

Centisome position: 37.46

GC content: 46.82

Gene sequence:

>393_bases
ATGAAATTTCAGGCCATTGTATTAGCAAGTTTTCTTGTCATGCCTTATGCGTTGGCAGATGACCAGGGCGGATTAAAACA
GGATGCAGCGCCACCGCCGCCTCATGCAATAGAAGATGGCTATCGCGGAACCGATGATGCAAAAAAAATGACCGTTGATT
TCGCAAAAACCATGCATGATGGCGCTTCGGTTTCACTGCGCGGTAATTTGATTTCTCACAAAGGAGAAGACCGTTACGTT
TTTCGCGATAAGAGCGGTGAAATTAATGTTGTTATTCCTGCGGCAGTCTTTGATGGACGAGAAGTTCAGCCGGACCAGAT
GATCAACATTAGCGGAAGTCTGGATAAGAAAAGCGCTCCGGCCGTCGTTCGGGGCACTCATTTGCAGAAATAA

Upstream 100 bases:

>100_bases
TTTTAAATGCCTTATAACAATTGGCAGTAATCTTATTTGTCAATTATAAAAATAGCAACCAGACTTAATAAGTCAAACCA
AACGCAATTAAGGAGTCAGT

Downstream 100 bases:

>100_bases
AAATAAATTAGCCTGATGGCCTGAACTACTGGGCCATTAGGGTATTGGGTTATGCTATTTGTCATCCTTTTAATTGCGAT
AATGCAGGGTTAATTTATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKTMHDGASVSLRGNLISHKGEDRYV
FRDKSGEINVVIPAAVFDGREVQPDQMINISGSLDKKSAPAVVRGTHLQK

Sequences:

>Translated_130_residues
MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKTMHDGASVSLRGNLISHKGEDRYV
FRDKSGEINVVIPAAVFDGREVQPDQMINISGSLDKKSAPAVVRGTHLQK
>Mature_130_residues
MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKTMHDGASVSLRGNLISHKGEDRYV
FRDKSGEINVVIPAAVFDGREVQPDQMINISGSLDKKSAPAVVRGTHLQK

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787817, Length=130, Percent_Identity=99.2307692307692, Blast_Score=263, Evalue=3e-72,
Organism=Escherichia coli, GI1789401, Length=115, Percent_Identity=33.9130434782609, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 14079; Mature: 14079

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKTMHD
CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
GASVSLRGNLISHKGEDRYVFRDKSGEINVVIPAAVFDGREVQPDQMINISGSLDKKSAP
CCEEEEECCEECCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCC
AVVRGTHLQK
EEEECCCCCC
>Mature Secondary Structure
MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKTMHD
CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
GASVSLRGNLISHKGEDRYVFRDKSGEINVVIPAAVFDGREVQPDQMINISGSLDKKSAP
CCEEEEECCEECCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCC
AVVRGTHLQK
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]