| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is U
Identifier: 218700148
GI number: 218700148
Start: 1883649
End: 1884134
Strand: Reverse
Name: U
Synonym: ECIAI39_1792
Alternate gene names: NA
Gene position: 1884134-1883649 (Counterclockwise)
Preceding gene: 218700149
Following gene: 218700147
Centisome position: 36.71
GC content: 53.91
Gene sequence:
>486_bases ATGATGATGGTGCTGGGATTGTACGTGTTTATGCTGCGCACCGTTCCGTATCAGGAACTGCAGTATCAACGCAGCTGGCG ACATGCGGCAAACAGTCGGGTAAACCGACGTCCGTCCACGCAGTTTCTGGGACCGGAAAACGACATGCTGACGCTTTCCG GTGTTCTTATGCCGGAAATAACAGGCGGCAGGCTGTCGTTGCTGGCACTGGAGCAGATGGCAGAACAGGGGAAAGCATGG CCCCTGATTGAAGGCAGCGGCACGATTTACGGCATGTATGTGATTGAGGGACTGAATCAGACTAAAACGGAGTTTTTCCG CGACGGTATGCCGCGCCGGATTGAGTTCACCCTGTCGCTCAAACGAGTGGATGAATCCCTGTCCGATATGTTCGGTGATC TCAGTGCGCAACTGAATAATCTGCAGGACACGGCAACGTCTGCCTTAAGCGATATCAGTAAAACGGTGGGAGGGCTGCTG TCGTGA
Upstream 100 bases:
>100_bases AGGATATTGCGCGGGAGGTGGCACGCCAGCTTGATGAACGTGAACGCAGGCTGAAGGCAAAAGCCAGGAGTAACTACAGC GATCAGGGGGGATACGACGC
Downstream 100 bases:
>100_bases ATTTCAGCTCTGAACTGCTTAACAAAGGCAACAAAACTCCCGCATTCAGCATCAGTATTGAGGGCAGGGATATCACCACT GTGCTGGATAACCGCCTGAT
Product: bacteriophage tail protein GpU
Products: NA
Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Protein U; Phage Tail Protein U; Fels-2 Prophage Protein; Tail Fiber Protein; Phage-Related Protein; Phage Tail Assembly Protein; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein; Tail Fiber Protein Of Prophage; Bacteriophage P2 Tail Protein GPU; Phage Tail; Tail Protein; Tail Protein U
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPENDMLTLSGVLMPEITGGRLSLLALEQMAEQGKAW PLIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQDTATSALSDISKTVGGLL S
Sequences:
>Translated_161_residues MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPENDMLTLSGVLMPEITGGRLSLLALEQMAEQGKAW PLIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQDTATSALSDISKTVGGLL S >Mature_161_residues MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPENDMLTLSGVLMPEITGGRLSLLALEQMAEQGKAW PLIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQDTATSALSDISKTVGGLL S
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18060; Mature: 18060
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPENDMLTLSGVLMPEI CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCC TGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSL CCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEHHH KRVDESLSDMFGDLSAQLNNLQDTATSALSDISKTVGGLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPENDMLTLSGVLMPEI CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCC TGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSL CCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEHHH KRVDESLSDMFGDLSAQLNNLQDTATSALSDISKTVGGLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA