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The map label for this gene is ychJ

Identifier: 218699939

GI number: 218699939

Start: 1638864

End: 1639322

Strand: Reverse

Name: ychJ

Synonym: ECIAI39_1568

Alternate gene names: 218699939

Gene position: 1639322-1638864 (Counterclockwise)

Preceding gene: 218699943

Following gene: 218699938

Centisome position: 31.94

GC content: 46.84

Gene sequence:

>459_bases
GTGTCTCAGCTTTGTCCCTGTGGTAGTGCTGTCGAGTATAGCCTATGTTGCCACCCTTATGTGTCTGGTGAAAAGGTTGC
ACCTGATCCAGAACATCTCATGCGTTCGCGTTACTGCGCTTTTGTGATGAAAGACGCAGATTATTTAATAAAGACCTGGC
ATCCATCTTGTGGAGCGGCGGCGTTACGTGCCGAATTGATGGCCGGATTTGCGCATACTGAATGGTTGGGATTGACCGTA
TTTGAACATTGTTGGCAGGACGCCGACAATATCGGATTTGTCAGTTTTGTTGCTCGATTTACCGAAGGTGGCAAAACAGG
TGCAATCATTGAACGTTCGCGATTTTTGAAAGAAAACGGTCAATGGTACTATATTGACGGTACACGTCCGCAGTTTGGCC
GCAACGATCCCTGCCCTTGTGGTTCAGGTAAAAAATTTAAAAAGTGCTGCGGCCAATAA

Upstream 100 bases:

>100_bases
ATTCCCCTGGAATGCAATCGTAGCCACATCGCTACTGCTCGGTTAACATAGTGCTACTCAGGCGGTTAATACGCCGTTAT
TGTTTCCAGGGAGATTATTT

Downstream 100 bases:

>100_bases
TGGTTGACGGTACGGTTTAGCAAACACTCTCAACAAGGTTTTTCCAGCAATGCATTCACTCCAACGTAAAGTTCTGCGTA
CTATTTGTCCGGACCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMKDADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTV
FEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ

Sequences:

>Translated_152_residues
MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMKDADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTV
FEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
>Mature_151_residues
SQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMKDADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVF
EHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=152, Percent_Identity=99.3421052631579, Blast_Score=320, Evalue=3e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 16991; Mature: 16859

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
7.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMKDADYLIKTWHPSCGAA
CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHH
ALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
CEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMKDADYLIKTWHPSCGAA
CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHH
ALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
CEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA