| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is 218699866
Identifier: 218699866
GI number: 218699866
Start: 1565465
End: 1566688
Strand: Direct
Name: 218699866
Synonym: ECIAI39_1492
Alternate gene names: NA
Gene position: 1565465-1566688 (Clockwise)
Preceding gene: 218699864
Following gene: 218699867
Centisome position: 30.5
GC content: 47.47
Gene sequence:
>1224_bases ATGATCAAAGAGACTGTTACGATGAGTCATAAGGAACTCCACCGACTTCAGATTATTCAGGAACAAGCTGCGGCACGCAT TGGCATTTCTATTCGGCAGGTTAAACGTCTGGTGCAACGGTATAGAAATGAAGGGCCTTCTGGTCTGGTTTCCCACCGAC GTGGAAAGCGTCCTAATAATTCCTTTTCTACTGAATTCAGAGCAACAGTAATTTCACTCCTCAAAGGCCGTTACGCTGAT TTTGGACCTACGTTTGCGTGCGAAAAATTGCGCGAGATACACGGTTTATCTTTATCCGTTGAAACTCTCAGAAAGTGGAT GATAGAAGAGGGGTTATGGCGTGAACGCCGTCGTAAAATTGCCCGTATATATCAACGCCGCATGCGACGATCATCTTACG GTGAACTGATCCAGATTGATGGCTCACCTCATGACTGGTTTGAAAATCGAGGCCCCAGATGTACACTGATCGTTTTCATT GATGATGCCACCAGTGCGTTGATGGCGTTGCGTTTTGTGCCTGCTGAAACAACCCGGGCTTACATGGAAACCCTCCGGGG TTACCTTAATGATCATGGCGTACCGCTCGCTCTCTACTCTGATAGACACAGTATATTCAGGGTAAATAACCCAGAGCGGG AAGGTGAGCTGACCCAGTTCACTCGTGCGATAAAGACACTGGGCATCGAGCCAATCCATGCCAACAGCCCGCAGGCAAAA GGGCGGGTAGAGCGCGCCAATCAGACACTACAGGACAGGCTGGTCAAAGAAATGCGGCTTCAGAATATCAGTGATATTGA AACAGCAAATGCATGGTTGCCGACCTTTATTGAAGCCTATAACAACCGGTTCGCTACGTCGCCTCGTACTACTGATAATG CTCATCTTGATGTGCACCATTCTGAAGAGGAACTGGGTTATATCTTCAGCCTACAGGCGAAGCGCGTTCTGTCTAAAAAT CTCACTTTCCAGTACAAAAGCAGTGCGTTTCAGGTACGCAGTGAGGGTCGGGGATATCGACTTAGGCATTCGGTTGTTAC TGTATGCGAGAACTTTGACGGTGAAATTAACGTTCTGTATGACGGGAAAGCGCTGGGCTGGGAAAAGTATGTTGATGGCC CGGAGCCTATACCACTGGATGATGAAAAGAGTGTCCATGAACGAGTGGATAATGCCCGTATTGATTTACGCTCAAAATAC TATGTTAAACCTAAAGCTGACTGA
Upstream 100 bases:
>100_bases CCGAAAGGCACGGAGAAGCAGGCTATTGTTAACACCAAGCTGTAATGTCCCCTTTGAACCATTCTAAAATGTCCCCAGAC AATTCTCTGGGGGATTTTTC
Downstream 100 bases:
>100_bases GGTAGCCTGAGTTTAACGGACACTCCTTCCTGAAATAGAATGGCATCAGAAGGAGCTAATAATGAGCAGAAAAAACCAAC GTTACTCTAAAGAGTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNNSFSTEFRATVISLLKGRYAD FGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKIARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFI DDATSALMALRFVPAETTRAYMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHHSEEELGYIFSLQAKRVLSKN LTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLYDGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKY YVKPKAD
Sequences:
>Translated_407_residues MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNNSFSTEFRATVISLLKGRYAD FGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKIARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFI DDATSALMALRFVPAETTRAYMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHHSEEELGYIFSLQAKRVLSKN LTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLYDGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKY YVKPKAD >Mature_407_residues MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNNSFSTEFRATVISLLKGRYAD FGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKIARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFI DDATSALMALRFVPAETTRAYMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHHSEEELGYIFSLQAKRVLSKN LTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLYDGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKY YVKPKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 47174; Mature: 47174
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNN CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC SFSTEFRATVISLLKGRYADFGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKI CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH ARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFIDDATSALMALRFVPAETTRA HHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCHHHHH YMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK HHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHH CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC SEEELGYIFSLQAKRVLSKNLTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLY CHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCEEHHHHHHHHHHCCCCCEEEEE DGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKYYVKPKAD CCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECCEEEECCCCC >Mature Secondary Structure MIKETVTMSHKELHRLQIIQEQAAARIGISIRQVKRLVQRYRNEGPSGLVSHRRGKRPNN CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC SFSTEFRATVISLLKGRYADFGPTFACEKLREIHGLSLSVETLRKWMIEEGLWRERRRKI CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH ARIYQRRMRRSSYGELIQIDGSPHDWFENRGPRCTLIVFIDDATSALMALRFVPAETTRA HHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCHHHHH YMETLRGYLNDHGVPLALYSDRHSIFRVNNPEREGELTQFTRAIKTLGIEPIHANSPQAK HHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC GRVERANQTLQDRLVKEMRLQNISDIETANAWLPTFIEAYNNRFATSPRTTDNAHLDVHH CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC SEEELGYIFSLQAKRVLSKNLTFQYKSSAFQVRSEGRGYRLRHSVVTVCENFDGEINVLY CHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCEEHHHHHHHHHHCCCCCEEEEE DGKALGWEKYVDGPEPIPLDDEKSVHERVDNARIDLRSKYYVKPKAD CCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]