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The map label for this gene is ynfA

Identifier: 218699852

GI number: 218699852

Start: 1552831

End: 1553157

Strand: Direct

Name: ynfA

Synonym: ECIAI39_1476

Alternate gene names: 218699852

Gene position: 1552831-1553157 (Clockwise)

Preceding gene: 218699849

Following gene: 218699853

Centisome position: 30.26

GC content: 51.38

Gene sequence:

>327_bases
ATGATTAAAACAACGTTACTATTTTTTGCTACTGCGCTGTGTGAAATTATTGGATGCTTTCTGCCCTGGTTGTGGTTAAA
ACGAAACGCCAGTATCTGGCTGTTGCTTCCGGCGGGGATTTCTCTGGCACTGTTTGTCTGGTTGTTAACGTTGCATCCTG
CGGCGAGTGGGCGTGTTTACGCGGCTTATGGTGGCGTTTATGTCTGCACGGCGTTGATTTGGCTGCGCGTTGTGGATGGC
GTGAAACTGAGTCTTTATGACTGGACGGGGGCGTTGATTGCGCTTTGCGGCATGTTGATCATTGTTGCGGGCTGGGGGCG
CGCGTAA

Upstream 100 bases:

>100_bases
CTACACCATCCACTGCGAACGCAAAACGTTCAAGGAGGGTGTTTATATTGATGATATTATGTCGTCCTATAACTATACAT
GATGTCAATAAGTGACAAAG

Downstream 100 bases:

>100_bases
GGACATAAATCCATTTTATCAATAAGATACGAGGAAGTGTCAGCTGACAAAAGGTATTCTATTTCATCTTTTGTCAACCA
TTCACGGCGCAAATATACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALIWLRVVDG
VKLSLYDWTGALIALCGMLIIVAGWGRA

Sequences:

>Translated_108_residues
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALIWLRVVDG
VKLSLYDWTGALIALCGMLIIVAGWGRA
>Mature_108_residues
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALIWLRVVDG
VKLSLYDWTGALIALCGMLIIVAGWGRA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=107, Percent_Identity=98.1308411214953, Blast_Score=206, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 11858; Mature: 11858

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEE
AAYGGVYVCTALIWLRVVDGVKLSLYDWTGALIALCGMLIIVAGWGRA
EECCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEE
AAYGGVYVCTALIWLRVVDGVKLSLYDWTGALIALCGMLIIVAGWGRA
EECCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]