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The map label for this gene is ydhA

Identifier: 218699792

GI number: 218699792

Start: 1488849

End: 1489178

Strand: Direct

Name: ydhA

Synonym: ECIAI39_1416

Alternate gene names: 218699792

Gene position: 1488849-1489178 (Clockwise)

Preceding gene: 218699791

Following gene: 218699793

Centisome position: 29.01

GC content: 45.76

Gene sequence:

>330_bases
ATGTCTATGAAAAAACTGTTACTGATCTGTTTGCCGGTCCTTCTCACCGGCTGTAGCGCGTTCAATCAACTGGTTGAGCG
CATGCAAACCGATACGCTGGAATACCAGTGTGATGAAAAACCGTTGACGGTCAAACTGAATAATCCGCGCCAGGAAGTCA
GTTTTGTTTATGATAATCAACTATTGCATCTCAAACAGGGCATTTCTGCGTCTGGTGCACGTTACACCGACGGGATCTAT
GTTTTCTGGTCGAAAGGCGAGGAAGCGACTGTCTATAAACGTGACCGCATCGTCTTGAATAACTGTCAGTTACAAAATCC
ACAGCGTTGA

Upstream 100 bases:

>100_bases
TGATATCAGAGTTAACTGAATTTTTCTTACCGCGTCTGCCGTTACACTTGGAACGTTAGGGAGGGCGTATTGCCCTCCAG
ACCAGGAAAGTCTTCGGGAT

Downstream 100 bases:

>100_bases
GATTTTTCCAGGGGCGGCGCACAATAGCGTCACCCACTGACAATCCGTAAAGAAAACCATGTCTGATAACGACGAATTGC
AGCAAATCGCGCATCTGCGC

Product: lysozyme inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSMKKLLLICLPVLLTGCSAFNQLVERMQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIY
VFWSKGEEATVYKRDRIVLNNCQLQNPQR

Sequences:

>Translated_109_residues
MSMKKLLLICLPVLLTGCSAFNQLVERMQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIY
VFWSKGEEATVYKRDRIVLNNCQLQNPQR
>Mature_108_residues
SMKKLLLICLPVLLTGCSAFNQLVERMQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYV
FWSKGEEATVYKRDRIVLNNCQLQNPQR

Specific function: Specifically inhibits C-type lysozymes [H]

COG id: COG3895

COG function: function code R; Predicted periplasmic protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Anchored to the periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mliC family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081949, Length=109, Percent_Identity=95.4128440366973, Blast_Score=202, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018660 [H]

Pfam domain/function: PF09864 DUF2091 [H]

EC number: NA

Molecular weight: Translated: 12572; Mature: 12441

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKKLLLICLPVLLTGCSAFNQLVERMQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHEEEEECCC
LLHLKQGISASGARYTDGIYVFWSKGEEATVYKRDRIVLNNCQLQNPQR
EEEECCCCCCCCCEECCCEEEEECCCCCCEEEECCEEEEECCCCCCCCC
>Mature Secondary Structure 
SMKKLLLICLPVLLTGCSAFNQLVERMQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHEEEEECCC
LLHLKQGISASGARYTDGIYVFWSKGEEATVYKRDRIVLNNCQLQNPQR
EEEECCCCCCCCCEECCCEEEEECCCCCCEEEECCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1356963 [H]