| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is ydhW
Identifier: 218699763
GI number: 218699763
Start: 1455523
End: 1456170
Strand: Direct
Name: ydhW
Synonym: ECIAI39_1386
Alternate gene names: 218699763
Gene position: 1455523-1456170 (Clockwise)
Preceding gene: 218699762
Following gene: 218699764
Centisome position: 28.36
GC content: 52.78
Gene sequence:
>648_bases ATGGGAGAGATGAACCATCAGGATGAATTGCCGTTAGCGGAAGTCAGTGAAATTGATGAGGCGAAGCGGCAATGGTTGCA GGGGATGCGTCACCCCGTTGATACGGTAACCGAACCAGAACCGGCTGAAATCCTGGCAGAGTTCATTCGCCAGCATTCTG CGGCTGGGCAGCTGGTGGCGCGCACCGTGTTTCTCTCGCCACCCTATTCGGTTGCAGAAGAGGAACTGCCAGTTTTGCTG GAAAACATTAAGCAGAACGGAGACTACGCGGATATCGCGTGTATGACGGGAAGCCAGGATGATTACTATTACTCAACGCA GGCCATGAGTGAAAACTACGCGGCGATGTCTTTGCAAGTTGTGGAGCAGGACATTTGTCGCGCCATTGCACACGCCGTTC GTTTTGAGTGCCAGACGTATCCTCGTCCTTACAAAGTCGCCATGCTGATGCAAGCGCCATATTACTTCCAGGAAGCGCAG ATTGAAGCCGCGATCGCCGCGATGGATGTTGCACCTGAATATGCCGATATACGGCAGGTGGAGTCATCGACGGCGGTGTT GTACTTGTTTAGCGAGCGATTTATGACCTATGGCAAGGCGTATGGCTTATGCGAATGGTTCGAGGTAGAGCAGTTTCAGA ACCCCTGA
Upstream 100 bases:
>100_bases CCCACAGCTTGGTTGTCCGACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGTCGATCTGGCAGCACACA ATCTACTGCCCGCGTAAGGA
Downstream 100 bases:
>100_bases AATTTCAGGGAGATGTCATGGATAGGGTGGACAGTTGCAGCCACTGCATTAGGGGATAATCAGATGTCCTTCACTCGACG CAAATTTGTTCTGGGGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MGEMNHQDELPLAEVSEIDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARTVFLSPPYSVAEEELPVLL ENIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQ IEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
Sequences:
>Translated_215_residues MGEMNHQDELPLAEVSEIDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARTVFLSPPYSVAEEELPVLL ENIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQ IEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP >Mature_214_residues GEMNHQDELPLAEVSEIDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARTVFLSPPYSVAEEELPVLLE NIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQI EAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787961, Length=215, Percent_Identity=95.8139534883721, Blast_Score=408, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24496; Mature: 24365
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEMNHQDELPLAEVSEIDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RTVFLSPPYSVAEEELPVLLENIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQV HHEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEHHHHCCCHHHHHHHH VEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQV HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHH ESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP CCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCC >Mature Secondary Structure GEMNHQDELPLAEVSEIDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RTVFLSPPYSVAEEELPVLLENIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQV HHEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEHHHHCCCHHHHHHHH VEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQV HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHH ESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP CCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9023191; 9278503 [H]