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The map label for this gene is ydjH

Identifier: 218699660

GI number: 218699660

Start: 1347033

End: 1347980

Strand: Direct

Name: ydjH

Synonym: ECIAI39_1281

Alternate gene names: 218699660

Gene position: 1347033-1347980 (Clockwise)

Preceding gene: 218699659

Following gene: 218699661

Centisome position: 26.25

GC content: 45.25

Gene sequence:

>948_bases
ATGGATAATCTCGACGTTATTTGTATAGGTGCCGCTATTGTTGATATTCCATTGCAACCGGTCAGTAAAAATATCTTTGA
TGTGGATTCTTATCCTCTTGAAAGAATCGCAATGACCACCGGGGGTGATGCAATAACCGAAGCAACAATTATTTCTCGTC
TGGGCCATCGCACAGCATTAATGAGTCGTATTGGTAAAGATGCCGCAGGGCAATTTATTCTCGACCATTGCCGCAAAGAG
AATATTGATATTCAAAGCCTGAAGCAGGACGTCAGCATAGATACCTCAATTAACGTTGGACTGGTGACGGAGGATGGCGA
GCGGACGTTTGTCACAAACCGTAACGGCAGTCTGTGGAAATTGAATATTGACGATGTTGATTTTTCGCGGTTTTCTCAGG
CGAAATTATTATCTCTGGCCAGTATTTTCAACAGTCCTCTATTGGATGGTAAAGCGCTAACAGAAATTTTTACGCAAGCT
AAAGCCCAGCAGATGATTATCTGTGCAGATATGATCAAACCGCGGTTGAATGAAACGCTGGATGATATTTGCGAAGCATT
GAGTTATGTCGATTATCTGTTTCCTAATTTTGCCGAGGCAAAATTACTCACCGGGAAAGAGACACTGGATGAAATTGCTG
ACTGCTTTCTTGCGTGCGGCGTAAAAACGGTGGTGATTAAAAAGGGTAAAGACGGCTGCTTTATCAAGCGTGGTGACATG
ACGATGAAGGTGCCGGCGGTCGCAGGAATAACCGCCATCGACACCATTGGCGCGGGCGATAACTTTGCTTCAGGTTTTAT
TGCGGCACTGTTAGAAGGCAAAAATCTGCGTGAATGCGCACGCTTTGCCAATGCAACGGCGGCTATCTCGGTTCTAAGCG
TCGGTGCCACCACCGGCGTAAAAAACAGAAAGCTGGTCGAACAATTGCTGGAAGAATACGAAGGATAA

Upstream 100 bases:

>100_bases
CCTTTCCTGCATTTAGAACGTGAAGTGCGTAAAGCTGTAAAAGAACGGGCATTGGATAAAATTAAACTGTTCGGTTCTGA
TGGCAAAGCGGAATAATGAT

Downstream 100 bases:

>100_bases
TGAAGGCAAATGAAAAAGATACCTTTAGGCACAACGGATATTACGCTTTCGCGAATGGGGTTGGGGACATGGGCCATTGG
CGGCGGTCCTGCATGGAATG

Product: putative sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAITEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFSRFSQAKLLSLASIFNSPLLDGKALTEIFTQA
KAQQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKKGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG

Sequences:

>Translated_315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAITEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFSRFSQAKLLSLASIFNSPLLDGKALTEIFTQA
KAQQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKKGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG
>Mature_315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAITEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFSRFSQAKLLSLASIFNSPLLDGKALTEIFTQA
KAQQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKKGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=315, Percent_Identity=98.7301587301587, Blast_Score=632, Evalue=0.0,
Organism=Escherichia coli, GI1790193, Length=301, Percent_Identity=30.5647840531561, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87082281, Length=276, Percent_Identity=27.1739130434783, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34124; Mature: 34124

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAITEATIISRLGHRTAL
CCCCCEEEEEHEEEECCCCHHCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
MSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFSRFSQAKLLSLASIFNSPLLDGKALTEIFTQAKAQQMIICADMIKPRLNETL
EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKKGKDGCFIKRGDM
HHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCC
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGV
EEECCCHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCC
KNRKLVEQLLEEYEG
CHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAITEATIISRLGHRTAL
CCCCCEEEEEHEEEECCCCHHCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
MSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFSRFSQAKLLSLASIFNSPLLDGKALTEIFTQAKAQQMIICADMIKPRLNETL
EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKKGKDGCFIKRGDM
HHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCC
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGV
EEECCCHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCC
KNRKLVEQLLEEYEG
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]