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The map label for this gene is yebF

Identifier: 218699582

GI number: 218699582

Start: 1273344

End: 1273712

Strand: Direct

Name: yebF

Synonym: ECIAI39_1203

Alternate gene names: 218699582

Gene position: 1273344-1273712 (Clockwise)

Preceding gene: 218699581

Following gene: 218699583

Centisome position: 24.81

GC content: 50.14

Gene sequence:

>369_bases
ATGGAGAAAAACATGAAAAAAAGAGGGGCGTTTTTAGGGCTGTTGTTGGTTTCTGCCTGCGCATCAGTTTTCGCTGCCAA
TAATGAAACCAGCAAGTCGGTCACTTTCCCAAAGTGTGAAGGTCTGGATGCTGCCGGAATTGCCGCGAGCGTAAAACGTG
ATTACCAACAAAATCGCGTGGCGCGCTGGGCTGATGATCAAAAAATTGTCGGTCAGGCCGACCCCGTGGCATGGGTCAGT
TTGCAGGACATTCAGGGGAAAGATGATAAATGGTCAGTACCGCTAACCGTGCGTGGTAAAAGTGCCGATATTCATTACCA
GGTCAGCGTGGACTGCAAAGCGGGAATGGCGGAATATCAGCGGCGTTAA

Upstream 100 bases:

>100_bases
CGTCGGTGCTGAATCCGAAGAGGAAGATGCCTCACACGCGGCCTGAAGCAACTTGCGCTCCTGACAATTTGTACCATGCT
TTCTCCTGAATCATTGTGCT

Downstream 100 bases:

>100_bases
TGGCTTCTGATAATTCGATTGACCGTCGGCGGATGCGGCGCGAGTGCCTTGTCCGCCAACAACACACCACAATCGTAGGC
CTGAGAAGACGCAACAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MEKNMKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVS
LQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR

Sequences:

>Translated_122_residues
MEKNMKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVS
LQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR
>Mature_122_residues
MEKNMKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVS
LQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yebF family [H]

Homologues:

Organism=Escherichia coli, GI145693150, Length=118, Percent_Identity=99.1525423728814, Blast_Score=240, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020236
- ProDom:   PD077599 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13406; Mature: 13406

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNMKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ
HHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHC
RR
CC
>Mature Secondary Structure
MEKNMKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQ
HHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCHHHHC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]