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The map label for this gene is fliH

Identifier: 218699499

GI number: 218699499

Start: 1190183

End: 1190869

Strand: Reverse

Name: fliH

Synonym: ECIAI39_1116

Alternate gene names: 218699499

Gene position: 1190869-1190183 (Counterclockwise)

Preceding gene: 218699502

Following gene: 218699498

Centisome position: 23.2

GC content: 57.35

Gene sequence:

>687_bases
ATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACCGGCAGAGTTTGTGCCAATGGTCGA
GTCGGAAGAAACCATTATTGAAGAGGCCGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCAAATGCAGGCCCACGAGC
AGGGTTATCAGGCGGGGATTGCCGAAAGTCGCCAGCAAGGTCACGAACAGGGCTATCAGGAAGGACTGGCCCAGGGGCTG
GAGCAAGGTCTGGCAGAGGCGAAGGCTCAACAAGCGCCAATTCATGCCCGGATGCAGCAACTGGTCAGCGAATTTCAAAC
TACCCTTGATGCGCTTGATAGTGTGATAGCTTCGCGCCTGATGCAGATGGCGCTGGAGGCAGCACGTCAGGTCATAGGTC
AGACGCCAACGGTGGATAACTCGGCACTGATCAAACAGATCCAACAGTTGTTGCAGCAAGAACCGTTATTCAGCGGGAAA
CCACAGCTGCGCGTACACCCGGATGATCTGCAACGTGTGGATGATATGCTCGGCGCAACTTTAAGTTTGCATGGCTGGCG
CTTGCGGGGCGATCCCACCCTCCATCCTGGCGGCTGTAAAGTCTCCGCCGATGAAGGCGATCTCGACGCCAGTGTCGCCA
CCCGCTGGCAAGAACTCTGCCGTCTGGCAGCACCAGGAGTGGTGTAA

Upstream 100 bases:

>100_bases
CGTCTGTCGCAGGTCGAAAACGAACAGAAAGCGATTCTGCTGATTGTGCGCCGTCTTGCCGAAACTGGCGAGATGGTGAT
TGGCAGCGGCGAGGATACCT

Downstream 100 bases:

>100_bases
TGACCACGCGCCTGACTCGCTGGCTAACCACGCTGGATAACTTTGAAGCCAAAATGGCGCAGTTGCCTGCGGTACGTCGC
TACGGGCGATTAACCCGCGC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAESRQQGHEQGYQEGLAQGL
EQGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV

Sequences:

>Translated_228_residues
MSDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAESRQQGHEQGYQEGLAQGL
EQGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
>Mature_227_residues
SDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAESRQQGHEQGYQEGLAQGLE
QGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKP
QLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=228, Percent_Identity=97.3684210526316, Blast_Score=403, Evalue=1e-114,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 25042; Mature: 24911

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGI
CCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AESRQQGHEQGYQEGLAQGLEQGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGAT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHH
LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
HHHCCEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDNLPWKTWTPDDLAPPPAEFVPMVESEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGI
CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AESRQQGHEQGYQEGLAQGLEQGLAEAKAQQAPIHARMQQLVSEFQTTLDALDSVIASRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGAT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHH
LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV
HHHCCEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8224881 [H]