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The map label for this gene is yjdA [H]

Identifier: 218699418

GI number: 218699418

Start: 1087878

End: 1090274

Strand: Reverse

Name: yjdA [H]

Synonym: ECIAI39_1026

Alternate gene names: 218699418

Gene position: 1090274-1087878 (Counterclockwise)

Preceding gene: 218699419

Following gene: 218699417

Centisome position: 21.24

GC content: 51.77

Gene sequence:

>2397_bases
ATGCACGAAAAGAACATCGCCCTGCTTTGTGATGAAGCCGACCGACTTTTGCAACTGAACATTAATCTGCTCAGGCAAAT
GGTTGATGAGCCGGATGTGTTATCTGACGGTAAGAACGAAAACAGACTGCTTTTTGATAAACAGAAAGCACTGAAAAGAA
TTGAGGAGCTGGAGGGCGAACAAATCAAAACCGCCCGCAGGGAGATGGTGCTGGCTGTTGTCGGCACGATGAAAGCAGGC
AAATCAACCACCATCAACGCCATTGTGGGGCAGGAAATTCTGCCTAACCGTAACCGCCCCATGACCTCTGTACCGACGCT
CATCCGCCACGTTCCCGGAAAAACTGAGCCGGTCCTCCATCTGGAACATACTCAGCCTGTCCGCAATTTATTAATCACAC
TGCAGGAAAAACTCGCCACCCCGGCAGGACAGCAGGTCGCACAGACCCTGCAGCAAACCGGGGATACCCGCGAACTACTG
GATATTCTGACGGATGATGGCTGGCTCAAAAATGAATACCACGGGGAGGAGGAAATCTTTACCGGACTGGCATCGTTAAA
CGATCTGGTTCGTCTTGCTGCGGCAATGGGGAGTGACTTTCCTTTTGATGAATACGCAGAAGTGCAGAAACTGCCGGTGA
TCGACGTGGAATTCAGCCATCTGGTGGGGATGGATGAATGCCAGGGAACACTCACACTGCTGGATACTCCCGGCCCTAAT
GAAGCCGGACAACCACAGATGGAAGTGATGATGCGGGATCAACTGCAGAAAGCCTCTGCGGTGCTGGCGGTGATGGACTA
CACCCAGCTGAACTCGAAAGCCGATGAGGAGGTTCGTAAAGAGCTTAATGCCATTGCTGACGTGTCAGTCGGCCGTCTGT
TTGTGCTGGTCAATAAATTTGATCAAAAAGATCAGCGTAGTGATGATGCGGATACAGTCAGACAGATGGTTCCTAAGATG
CTGAACAGTGACGTGTTACCTGCTTCCCGCGTTTACCCCGGCTCTTCGCGCCAGGCGTACCTGGCTAACCGTGCACTTCA
TGCGTTACGGAATACCGGAACACTTCCTGCTGATAAAGCCTGGGTCGATGATTTTATCAGAGGTGCCTTCGGTTGCATGA
AAAAAGAATACGTCTGTAAAGACAGTGAACTGGCAACTGAAGGGGCGACAGACCTGTGGGAAGGCTCACTTATCGATCAA
CTGATAACGGAAGTCATACAGAGCTCACATTCCAGAGCTGCGGCACTGGCGGTTGACTCTGCCGCCGCAAAACTGATGCA
GAATGCAGAAAATATCAGTGAATACCTGTTGTTACGCCATCAGGGGCTACAGCAAAGCATTCAGTCACTGCAGTCGCATA
TCACCAGCCTGCTTGCGGATATCCGGGAAATCGCGGACTGTCAGGAGCAGGTGACCACTGATGTCAGAATGGCCATGGAG
GAGATCGATACTAAAACCCGGGAATTACTGATGGGGGTCTGCACCTCACTGGAAGAGGAGCTGAATGACTATTTCAGAAG
CGGTAAACGCAAAGAACAGCAAATGTTGGAGGAAGAAGACGCAGAACAACGAAGGTCTCAGTCCGGATTATGGGGGAAAA
TTTCTCAATGGTCCGGTACCAACAACCAGGGCCGGGAGGATTACAGGAAACGAGATTTTGCCCCGGACAGCCCCGAAATA
AAATTCAGTGATCGCAGGGAAGCCCTTGAACTGATGACGCAAATCGAATCGACCGTGACCAGCCTGCACCGTGAGGCTGA
AGCACAGTTCCGGCCTGAGCTGGAGAAAATCGTCAGCGGGATTGAAACAGGTTTTCGTGGCACGGCCCTGTACGCCACAG
AAAACATTGCCGGTCGCATCAATGCCCGCCTGGAGGATGAGGGCTTTACCGTAAAAATCAGTTTTCCGGCAGTCAGCCAG
TTACAGACCCGGCTCGCGGTAAAAATAAATCTGAGTGCGCTTATGGAGGAAAGAACGGAGACCGTCACCCGTCGCCGTCG
GCAGAGTGGCGTATGGGGAACCGTTTGTCGATGGTTTGGCACCAGTGACCTGGGCTGGGAAAACTATGACGAGGATGTGA
GTCGCAGCGTGATCAATATCAACAAGGTCAGAGAGGAAGTTATGTCACTGACCCGGGCATATTTCGGGGAGCTGCAGGCA
TCCATTGAGCAGGATATTAACCAGCCCGTCCGCCAGGAAATCGATGCCTTTTTCTGCGCATTCAGGGAGAAAGTTGAACA
ACTGCGTAACACGCTGATTCAGAGCTCTGAAGATCATAAACGCGATCAGCAGGCGCAGGAACGGCTTACCGGGCGACTTC
AGGCATTAAATGAAAGGGTTCCTGAGCTCATTACTGACAGTAAGGCGCTGAGGGAAGAGCTGGAGACAATGCTGTGA

Upstream 100 bases:

>100_bases
CATCGATCGTTACTATCATATCGATCGTTATAAACGATCGTTTGTAGTAAATGACCTCCTCCGTGGTTGTCATGAAAATG
CGTCTCAGGAAGGTTAAATA

Downstream 100 bases:

>100_bases
CTTCACCATTTATTCAACAAATTGCTGATAACCGGATATGTCAGGTACTCACCTGTCTTCCTGAAAAATTTGTGGTTGAT
TTCGCAAACGGAATCGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 798; Mature: 798

Protein sequence:

>798_residues
MHEKNIALLCDEADRLLQLNINLLRQMVDEPDVLSDGKNENRLLFDKQKALKRIEELEGEQIKTARREMVLAVVGTMKAG
KSTTINAIVGQEILPNRNRPMTSVPTLIRHVPGKTEPVLHLEHTQPVRNLLITLQEKLATPAGQQVAQTLQQTGDTRELL
DILTDDGWLKNEYHGEEEIFTGLASLNDLVRLAAAMGSDFPFDEYAEVQKLPVIDVEFSHLVGMDECQGTLTLLDTPGPN
EAGQPQMEVMMRDQLQKASAVLAVMDYTQLNSKADEEVRKELNAIADVSVGRLFVLVNKFDQKDQRSDDADTVRQMVPKM
LNSDVLPASRVYPGSSRQAYLANRALHALRNTGTLPADKAWVDDFIRGAFGCMKKEYVCKDSELATEGATDLWEGSLIDQ
LITEVIQSSHSRAAALAVDSAAAKLMQNAENISEYLLLRHQGLQQSIQSLQSHITSLLADIREIADCQEQVTTDVRMAME
EIDTKTRELLMGVCTSLEEELNDYFRSGKRKEQQMLEEEDAEQRRSQSGLWGKISQWSGTNNQGREDYRKRDFAPDSPEI
KFSDRREALELMTQIESTVTSLHREAEAQFRPELEKIVSGIETGFRGTALYATENIAGRINARLEDEGFTVKISFPAVSQ
LQTRLAVKINLSALMEERTETVTRRRRQSGVWGTVCRWFGTSDLGWENYDEDVSRSVININKVREEVMSLTRAYFGELQA
SIEQDINQPVRQEIDAFFCAFREKVEQLRNTLIQSSEDHKRDQQAQERLTGRLQALNERVPELITDSKALREELETML

Sequences:

>Translated_798_residues
MHEKNIALLCDEADRLLQLNINLLRQMVDEPDVLSDGKNENRLLFDKQKALKRIEELEGEQIKTARREMVLAVVGTMKAG
KSTTINAIVGQEILPNRNRPMTSVPTLIRHVPGKTEPVLHLEHTQPVRNLLITLQEKLATPAGQQVAQTLQQTGDTRELL
DILTDDGWLKNEYHGEEEIFTGLASLNDLVRLAAAMGSDFPFDEYAEVQKLPVIDVEFSHLVGMDECQGTLTLLDTPGPN
EAGQPQMEVMMRDQLQKASAVLAVMDYTQLNSKADEEVRKELNAIADVSVGRLFVLVNKFDQKDQRSDDADTVRQMVPKM
LNSDVLPASRVYPGSSRQAYLANRALHALRNTGTLPADKAWVDDFIRGAFGCMKKEYVCKDSELATEGATDLWEGSLIDQ
LITEVIQSSHSRAAALAVDSAAAKLMQNAENISEYLLLRHQGLQQSIQSLQSHITSLLADIREIADCQEQVTTDVRMAME
EIDTKTRELLMGVCTSLEEELNDYFRSGKRKEQQMLEEEDAEQRRSQSGLWGKISQWSGTNNQGREDYRKRDFAPDSPEI
KFSDRREALELMTQIESTVTSLHREAEAQFRPELEKIVSGIETGFRGTALYATENIAGRINARLEDEGFTVKISFPAVSQ
LQTRLAVKINLSALMEERTETVTRRRRQSGVWGTVCRWFGTSDLGWENYDEDVSRSVININKVREEVMSLTRAYFGELQA
SIEQDINQPVRQEIDAFFCAFREKVEQLRNTLIQSSEDHKRDQQAQERLTGRLQALNERVPELITDSKALREELETML
>Mature_798_residues
MHEKNIALLCDEADRLLQLNINLLRQMVDEPDVLSDGKNENRLLFDKQKALKRIEELEGEQIKTARREMVLAVVGTMKAG
KSTTINAIVGQEILPNRNRPMTSVPTLIRHVPGKTEPVLHLEHTQPVRNLLITLQEKLATPAGQQVAQTLQQTGDTRELL
DILTDDGWLKNEYHGEEEIFTGLASLNDLVRLAAAMGSDFPFDEYAEVQKLPVIDVEFSHLVGMDECQGTLTLLDTPGPN
EAGQPQMEVMMRDQLQKASAVLAVMDYTQLNSKADEEVRKELNAIADVSVGRLFVLVNKFDQKDQRSDDADTVRQMVPKM
LNSDVLPASRVYPGSSRQAYLANRALHALRNTGTLPADKAWVDDFIRGAFGCMKKEYVCKDSELATEGATDLWEGSLIDQ
LITEVIQSSHSRAAALAVDSAAAKLMQNAENISEYLLLRHQGLQQSIQSLQSHITSLLADIREIADCQEQVTTDVRMAME
EIDTKTRELLMGVCTSLEEELNDYFRSGKRKEQQMLEEEDAEQRRSQSGLWGKISQWSGTNNQGREDYRKRDFAPDSPEI
KFSDRREALELMTQIESTVTSLHREAEAQFRPELEKIVSGIETGFRGTALYATENIAGRINARLEDEGFTVKISFPAVSQ
LQTRLAVKINLSALMEERTETVTRRRRQSGVWGTVCRWFGTSDLGWENYDEDVSRSVININKVREEVMSLTRAYFGELQA
SIEQDINQPVRQEIDAFFCAFREKVEQLRNTLIQSSEDHKRDQQAQERLTGRLQALNERVPELITDSKALREELETML

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790548, Length=744, Percent_Identity=34.005376344086, Blast_Score=374, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001401 [H]

Pfam domain/function: PF00350 Dynamin_N [H]

EC number: NA

Molecular weight: Translated: 90244; Mature: 90244

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEKNIALLCDEADRLLQLNINLLRQMVDEPDVLSDGKNENRLLFDKQKALKRIEELEGE
CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCH
QIKTARREMVLAVVGTMKAGKSTTINAIVGQEILPNRNRPMTSVPTLIRHVPGKTEPVLH
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEE
LEHTQPVRNLLITLQEKLATPAGQQVAQTLQQTGDTRELLDILTDDGWLKNEYHGEEEIF
ECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHH
TGLASLNDLVRLAAAMGSDFPFDEYAEVQKLPVIDVEFSHLVGMDECQGTLTLLDTPGPN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECHHHHCCCHHCCCCEEEEECCCCC
EAGQPQMEVMMRDQLQKASAVLAVMDYTQLNSKADEEVRKELNAIADVSVGRLFVLVNKF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
DQKDQRSDDADTVRQMVPKMLNSDVLPASRVYPGSSRQAYLANRALHALRNTGTLPADKA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH
WVDDFIRGAFGCMKKEYVCKDSELATEGATDLWEGSLIDQLITEVIQSSHSRAAALAVDS
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAAKLMQNAENISEYLLLRHQGLQQSIQSLQSHITSLLADIREIADCQEQVTTDVRMAME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIDTKTRELLMGVCTSLEEELNDYFRSGKRKEQQMLEEEDAEQRRSQSGLWGKISQWSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NNQGREDYRKRDFAPDSPEIKFSDRREALELMTQIESTVTSLHREAEAQFRPELEKIVSG
CCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IETGFRGTALYATENIAGRINARLEDEGFTVKISFPAVSQLQTRLAVKINLSALMEERTE
HHCCCCCEEEEEECCHHHHHCCEEECCCEEEEEECCCHHHHHHHHHHEEHHHHHHHHHHH
TVTRRRRQSGVWGTVCRWFGTSDLGWENYDEDVSRSVININKVREEVMSLTRAYFGELQA
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIEQDINQPVRQEIDAFFCAFREKVEQLRNTLIQSSEDHKRDQQAQERLTGRLQALNERV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
PELITDSKALREELETML
HHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MHEKNIALLCDEADRLLQLNINLLRQMVDEPDVLSDGKNENRLLFDKQKALKRIEELEGE
CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCH
QIKTARREMVLAVVGTMKAGKSTTINAIVGQEILPNRNRPMTSVPTLIRHVPGKTEPVLH
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEE
LEHTQPVRNLLITLQEKLATPAGQQVAQTLQQTGDTRELLDILTDDGWLKNEYHGEEEIF
ECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHH
TGLASLNDLVRLAAAMGSDFPFDEYAEVQKLPVIDVEFSHLVGMDECQGTLTLLDTPGPN
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECHHHHCCCHHCCCCEEEEECCCCC
EAGQPQMEVMMRDQLQKASAVLAVMDYTQLNSKADEEVRKELNAIADVSVGRLFVLVNKF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
DQKDQRSDDADTVRQMVPKMLNSDVLPASRVYPGSSRQAYLANRALHALRNTGTLPADKA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH
WVDDFIRGAFGCMKKEYVCKDSELATEGATDLWEGSLIDQLITEVIQSSHSRAAALAVDS
HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAAKLMQNAENISEYLLLRHQGLQQSIQSLQSHITSLLADIREIADCQEQVTTDVRMAME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIDTKTRELLMGVCTSLEEELNDYFRSGKRKEQQMLEEEDAEQRRSQSGLWGKISQWSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NNQGREDYRKRDFAPDSPEIKFSDRREALELMTQIESTVTSLHREAEAQFRPELEKIVSG
CCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IETGFRGTALYATENIAGRINARLEDEGFTVKISFPAVSQLQTRLAVKINLSALMEERTE
HHCCCCCEEEEEECCHHHHHCCEEECCCEEEEEECCCHHHHHHHHHHEEHHHHHHHHHHH
TVTRRRRQSGVWGTVCRWFGTSDLGWENYDEDVSRSVININKVREEVMSLTRAYFGELQA
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIEQDINQPVRQEIDAFFCAFREKVEQLRNTLIQSSEDHKRDQQAQERLTGRLQALNERV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
PELITDSKALREELETML
HHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 7610040; 9278503 [H]