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The map label for this gene is yeeS

Identifier: 218699408

GI number: 218699408

Start: 1082022

End: 1082498

Strand: Reverse

Name: yeeS

Synonym: ECIAI39_1016

Alternate gene names: 218699408

Gene position: 1082498-1082022 (Counterclockwise)

Preceding gene: 218699409

Following gene: 218699407

Centisome position: 21.09

GC content: 58.7

Gene sequence:

>477_bases
ATGCAGCAGCTTTCCTTTCTGCCCGGCGCGATGACGCCCGGCGAACGCAGTCTCATTCTGCGGGCCCTGAAAACCCTGGA
CCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTTAACATGGCGGGAC
TGGAGCGTGAAGAATTCCGGGTGCTGTATCTGAACAACCAGAATCAGCTGATTGCCGGTGAAACCCTCTTCACCGGCACC
ATCAACCGCACGGAAGTTCATCCCCGGGAGGTGATTAAACGCGCCCTGCACCACAATGCCGCTGCCGTGGTGCTGGCACA
CAATCACCCGTCCGGTGAAGTCACACCTGGCAAGGCAGACCGCCTTATCACGGAACGTCTGGTACAGGCACTGGGCCTGG
TGGATATCCGGGTGCCGGACCATCTGATAGTCGGTGGCAACCAGGTTTTCTCCTTTGCCGAACATGGTCTGCTTTAA

Upstream 100 bases:

>100_bases
ATGCCATGACGGTCCATTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAACGCCATTATGCGCATCATC
GACTGAGCAGGAGAAGTACA

Downstream 100 bases:

>100_bases
CCCGTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGT
GGTGAAGCCATGCGTATTCA

Product: putative DNA repair protein; CP4-44 prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MQQLSFLPGAMTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT
INRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPGKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL

Sequences:

>Translated_158_residues
MQQLSFLPGAMTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT
INRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPGKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL
>Mature_158_residues
MQQLSFLPGAMTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT
INRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPGKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788312, Length=148, Percent_Identity=97.972972972973, Blast_Score=292, Evalue=6e-81,
Organism=Escherichia coli, GI2367100, Length=158, Percent_Identity=81.0126582278481, Blast_Score=266, Evalue=5e-73,
Organism=Escherichia coli, GI1788997, Length=140, Percent_Identity=76.4285714285714, Blast_Score=224, Evalue=2e-60,
Organism=Escherichia coli, GI87082300, Length=120, Percent_Identity=47.5, Blast_Score=126, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17560; Mature: 17560

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLSFLPGAMTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHEEEEECCCCCCCCEE
VLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPGKAD
EEEECCCCCEEECCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHH
RLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL
HHHHHHHHHHHCEEEEECCCEEEECCHHHHHHHHCCCC
>Mature Secondary Structure
MQQLSFLPGAMTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHEEEEECCCCCCCCEE
VLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPGKAD
EEEECCCCCEEECCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHH
RLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL
HHHHHHHHHHHCEEEEECCCEEEECCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]