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The map label for this gene is yeeY

Identifier: 218699395

GI number: 218699395

Start: 1068626

End: 1069555

Strand: Direct

Name: yeeY

Synonym: ECIAI39_1001

Alternate gene names: 218699395

Gene position: 1068626-1069555 (Clockwise)

Preceding gene: 218699394

Following gene: 218699396

Centisome position: 20.82

GC content: 51.08

Gene sequence:

>930_bases
ATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGAAAAAGAAGGCAGTTTTGCGGCGGCGTCGGCCAAACT
CTACAAGACGCCGTCCGCTCTGAGTTACACCGTTCACAAGCTGGAAAGCGACCTTAATATTCAATTGCTTGATCGCAGCG
GACACCGCGCTAAATTCACCCGCACCGGAAAAATGTTATTAGAGAAAGGGCGGGAAGTTCTGCATACCGTGCGAGAACTG
GAAAAGCAGGCGATCAAACTGCATGAAGGCTGGGAAAACGAGCTGGTGATTGGCGTGGACGACACCTTCCCTTTTTCTCT
GCTTGCGCCACTCATTGAAGCTTTTTATCAACATCATAGCGTGACGCGCCTGAAGTTTATCAATGGCGTACTCGGTGGTT
CATGGGATGCCCTGACTCAGGGGCGAGCGGATATTATTGTTGGCGCGATGCATGAGCCACCATCTTCCAGTGAGTTTGGT
TTCTCGCGGTTGGGCGATCTTGAACAAGTCTTTGCGGTCGCGCCCCATCATCCGTTAGCCCAGGAAGAAGAACCGTTAAA
CCGTCGTATCATTAAGCAATATAGGGCGATTGTGGTAGGGGATACTGCGCAGGCCGGCGCTTCTACGGCCTCGCAACTTC
TCGACGAACAAGAAGCCATTACCGTTTTCGATTTTAAAACCAAGCTGGAGCTGCAAATTAGCGGCCTCGGCTGCGGCTAT
TTACCCCGTTATCTGGCGCAACGTTTTCTCGATAGTGGCGCGTTAATCGAGAAGAAAGTGGTCGCCCAAACTCTCTTTGA
ACCTGTCTGGATTGGCTGGAACGAACAGACCGCAGGACTTGCCAGCGCCTGGTGGCGAGACGAGATTTTAGCAAATAGTG
CGATCGCCGGTGTTTATGCAAAATCTGATGACGGAAAATCAGCCATTTAA

Upstream 100 bases:

>100_bases
TGAACTGGGATTTGAATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCA
TGCACTGCAAGGGGGCGTGT

Downstream 100 bases:

>100_bases
AGAAAAATTATTATGACAAGCCTCTCATTCTCTTGTCATTTCCCCCCCATTTAGGCACAATGCGCCGCTGTCAAAAAATG
ACTAAAAACCGACGTTTCAT

Product: putative DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLNRRIIKQYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAIAGVYAKSDDGKSAI

Sequences:

>Translated_309_residues
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLNRRIIKQYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAIAGVYAKSDDGKSAI
>Mature_309_residues
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLNRRIIKQYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAIAGVYAKSDDGKSAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=309, Percent_Identity=99.0291262135922, Blast_Score=624, Evalue=1e-180,
Organism=Escherichia coli, GI1789492, Length=286, Percent_Identity=38.8111888111888, Blast_Score=194, Evalue=4e-51,
Organism=Escherichia coli, GI1787949, Length=249, Percent_Identity=30.9236947791165, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1786508, Length=293, Percent_Identity=25.938566552901, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1786713, Length=277, Percent_Identity=24.5487364620939, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790262, Length=278, Percent_Identity=26.6187050359712, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787601, Length=165, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87082132, Length=261, Percent_Identity=26.0536398467433, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34170; Mature: 34170

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFT
CCHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHH
RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
VTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLA
HHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHCCCCCCC
QEEEPLNRRIIKQYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
CCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCH
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAIAGVYA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCHHHEEEE
KSDDGKSAI
ECCCCCCCC
>Mature Secondary Structure
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFT
CCHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHH
RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
VTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLA
HHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHCCCCCCC
QEEEPLNRRIIKQYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
CCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCH
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAIAGVYA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCHHHEEEE
KSDDGKSAI
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]