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The map label for this gene is ybiU

Identifier: 218699194

GI number: 218699194

Start: 842450

End: 843709

Strand: Reverse

Name: ybiU

Synonym: ECIAI39_0798

Alternate gene names: 218699194

Gene position: 843709-842450 (Counterclockwise)

Preceding gene: 218699195

Following gene: 218699192

Centisome position: 16.44

GC content: 51.35

Gene sequence:

>1260_bases
ATGACTTTTTCCTGTGAGACGCTGCCCACAGATGCGAAAGCGGCTATCCGAGAGATGAAAGCTGCGCTGCGGGAACAGCT
CAGTGATGTGCAACAGGTTTTCGATACACTCTCTGCAAAAATCGAAACGCGTGTTGCTGAAATCGATGCCCTAAAAGCGC
AAGGGCTGCCGGTTTGGCCGGAAGTTTCTTATAGTGATATTGCCGCAGGTACAGTAAGCGATGCCACTCGCAATGAAATT
AAACGTCGCGGCTGTGCAGTCATAAAAGGCCATTTCCCTCGCGAGCAGGCGATGGCGTGGGATCGTGCCATGCTCGATTA
TCTTGATATCAATCATTTTGATGATGTTTATAAAGGCCCTGGCGACAGTTTTTTCGGCTCGCTGGAGGCTTCTCGTCCCG
AAATCTATCCCATTTACTGGTCGCAAGCACAGATGCAGGCGCGGCAGAGCGAAAACATGGCTGCTGTGCAATCTTTTCTA
AACCGACTGTGGACGTCTGAAAGCAACGGCAAACAGTGGTTTAATCCTGATATCAGTGTGATTTATCCAGACAGGATCCG
CCGCCGCCCTCCAGGTACTACATCTAAAGGCCTGGGCGCGCATACCGATTCTGGTGCGCTGGAACGGTGGTTATTACCCG
CTTATCAGCGCGTTTTTGCCAATGTGTTTAATGGTAATTTCGATGATTACGATCCCTGGGATGCTGCACACCGGACCGAT
GTCGAAGAGTACACGGTAGATAACACTACAAAATGTTCGGTGTTCCGCACGTTTCAAGGCTGGACGGCGCTCTCTGATAT
GTTATCGGGTCAGGGATTGTTACATGTGGTGCCTATCCCGGAAGCGATGGCGTATGTTTTATTGCGCCCGCTGCTGGATG
ACGTACCGGACGATGAACTGTGCGGGGTTGCACCTGGCAAAGTTCTGCCCATTTCAGAGAAATGGCATCCACTACTGCTT
AAAGCGCTGACTTCCATTCCCGCGATAACAGCAGGGGATTCCGTCTGGTGGCACTGCGATGTGATCCACTCCGTCGCATC
GGTAAATAATCAACAAGGCTGGGGGAATGTGATGTATATCCCTGCCGCGCCGATGTGTGAGAAAAACCGGGCTTATGCGC
ATAACGTCAGGAAAGCACTGGAAAAAGGGGCATCACCGGGCGATTTCCCTCGAGAAGATTATGAAGCAAACTGGGATGGC
CGATTTACGCTGGATGATCTGAACATTCACGGTAAGCGCGCGCTGGGCATGGATGTTTGA

Upstream 100 bases:

>100_bases
TTGTGCACTGACTCAAGATTTTTATCTTTCGTTAACTTATTTTTAACTTAATGTATCAATCGTAATCATTTTACTTTCGA
ATGAAAGAATCGAGGTTGAT

Downstream 100 bases:

>100_bases
GAGGTGATGGATTAGTAGAAGTGAATTGATGTGAGGTTAAGAAAGCAGGTTCGGTGTTGCTCAGATTGCTGACAAAGTGC
GCTTTGTTCATGCCGGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTFSCETLPTDAKAAIREMKAALREQLSDVQQVFDTLSAKIETRVAEIDALKAQGLPVWPEVSYSDIAAGTVSDATRNEI
KRRGCAVIKGHFPREQAMAWDRAMLDYLDINHFDDVYKGPGDSFFGSLEASRPEIYPIYWSQAQMQARQSENMAAVQSFL
NRLWTSESNGKQWFNPDISVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNFDDYDPWDAAHRTD
VEEYTVDNTTKCSVFRTFQGWTALSDMLSGQGLLHVVPIPEAMAYVLLRPLLDDVPDDELCGVAPGKVLPISEKWHPLLL
KALTSIPAITAGDSVWWHCDVIHSVASVNNQQGWGNVMYIPAAPMCEKNRAYAHNVRKALEKGASPGDFPREDYEANWDG
RFTLDDLNIHGKRALGMDV

Sequences:

>Translated_419_residues
MTFSCETLPTDAKAAIREMKAALREQLSDVQQVFDTLSAKIETRVAEIDALKAQGLPVWPEVSYSDIAAGTVSDATRNEI
KRRGCAVIKGHFPREQAMAWDRAMLDYLDINHFDDVYKGPGDSFFGSLEASRPEIYPIYWSQAQMQARQSENMAAVQSFL
NRLWTSESNGKQWFNPDISVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNFDDYDPWDAAHRTD
VEEYTVDNTTKCSVFRTFQGWTALSDMLSGQGLLHVVPIPEAMAYVLLRPLLDDVPDDELCGVAPGKVLPISEKWHPLLL
KALTSIPAITAGDSVWWHCDVIHSVASVNNQQGWGNVMYIPAAPMCEKNRAYAHNVRKALEKGASPGDFPREDYEANWDG
RFTLDDLNIHGKRALGMDV
>Mature_418_residues
TFSCETLPTDAKAAIREMKAALREQLSDVQQVFDTLSAKIETRVAEIDALKAQGLPVWPEVSYSDIAAGTVSDATRNEIK
RRGCAVIKGHFPREQAMAWDRAMLDYLDINHFDDVYKGPGDSFFGSLEASRPEIYPIYWSQAQMQARQSENMAAVQSFLN
RLWTSESNGKQWFNPDISVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNFDDYDPWDAAHRTDV
EEYTVDNTTKCSVFRTFQGWTALSDMLSGQGLLHVVPIPEAMAYVLLRPLLDDVPDDELCGVAPGKVLPISEKWHPLLLK
ALTSIPAITAGDSVWWHCDVIHSVASVNNQQGWGNVMYIPAAPMCEKNRAYAHNVRKALEKGASPGDFPREDYEANWDGR
FTLDDLNIHGKRALGMDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787042, Length=418, Percent_Identity=83.4928229665072, Blast_Score=743, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010856 [H]

Pfam domain/function: PF07350 DUF1479 [H]

EC number: NA

Molecular weight: Translated: 46942; Mature: 46811

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSCETLPTDAKAAIREMKAALREQLSDVQQVFDTLSAKIETRVAEIDALKAQGLPVWP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EVSYSDIAAGTVSDATRNEIKRRGCAVIKGHFPREQAMAWDRAMLDYLDINHFDDVYKGP
CCCHHHHCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC
GDSFFGSLEASRPEIYPIYWSQAQMQARQSENMAAVQSFLNRLWTSESNGKQWFNPDISV
CCHHHCCCCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEECCCCEE
IYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNFDDYDPWDAAHRTD
ECCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
VEEYTVDNTTKCSVFRTFQGWTALSDMLSGQGLLHVVPIPEAMAYVLLRPLLDDVPDDEL
HHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCC
CGVAPGKVLPISEKWHPLLLKALTSIPAITAGDSVWWHCDVIHSVASVNNQQGWGNVMYI
CCCCCCCEEECCCCHHHHHHHHHHHCCCEECCCCEEEHHHHHHHHHHCCCCCCCCCEEEE
PAAPMCEKNRAYAHNVRKALEKGASPGDFPREDYEANWDGRFTLDDLNIHGKRALGMDV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TFSCETLPTDAKAAIREMKAALREQLSDVQQVFDTLSAKIETRVAEIDALKAQGLPVWP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EVSYSDIAAGTVSDATRNEIKRRGCAVIKGHFPREQAMAWDRAMLDYLDINHFDDVYKGP
CCCHHHHCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC
GDSFFGSLEASRPEIYPIYWSQAQMQARQSENMAAVQSFLNRLWTSESNGKQWFNPDISV
CCHHHCCCCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEECCCCEE
IYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNFDDYDPWDAAHRTD
ECCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
VEEYTVDNTTKCSVFRTFQGWTALSDMLSGQGLLHVVPIPEAMAYVLLRPLLDDVPDDEL
HHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCC
CGVAPGKVLPISEKWHPLLLKALTSIPAITAGDSVWWHCDVIHSVASVNNQQGWGNVMYI
CCCCCCCEEECCCCHHHHHHHHHHHCCCEECCCCEEEHHHHHHHHHHCCCCCCCCCEEEE
PAAPMCEKNRAYAHNVRKALEKGASPGDFPREDYEANWDGRFTLDDLNIHGKRALGMDV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]