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The map label for this gene is yafM

Identifier: 218698826

GI number: 218698826

Start: 459067

End: 459564

Strand: Reverse

Name: yafM

Synonym: ECIAI39_0422

Alternate gene names: 218698826

Gene position: 459564-459067 (Counterclockwise)

Preceding gene: 218698827

Following gene: 218698824

Centisome position: 8.95

GC content: 45.18

Gene sequence:

>498_bases
ATGTCTGAATATCGTCGTTATTACATCAAAGGGGGAACCTGGTTTTTCACGGTTAACCTACGAAATCGTCGAAGCCATCT
TCTGACCGCTCAGTTCCAGATGCTCCGTAAAGTCATTATTAACGTTAAGCGAGCCAGACCTTTTGAAATTAACGCCTGGG
TAGTTTTGCCGGAGCATATGCACTGTATCTGGACATTACCCGAAAGCGATGATGATTTTTCCTCTCGCTGGCGGGAGATT
AAAAAACAGTTCACCCATGCTTGTGGATTGCAAAATATCTGGCAACCGCGTTTTTGGGAGCACGCCATCCGCAATACCAA
AGACTATCGCCATCATGTTGATTATATTTATATAAATCCAGTAAAACATGGCTGGGTAAAGCAAGTGAGTGATTGGCCAT
TCTCAACGTTTCATCGCGATGTCGCGAAGGGGTTATATCCCATCGATTGGGCGGGGGACGTAACGGATTTTAGTGCCGGG
GAGCGTATCATTGTATAA

Upstream 100 bases:

>100_bases
CCTACAAATCTGTGCGTTTATGCGAGCCGCTTTCCCGTTATTCCATCACCTCATTGCCGACCTTTCCTTTTCTTCTTACC
GTTGAGAAAAAGGAGTCGCC

Downstream 100 bases:

>100_bases
TTGCGCGCCGATGCCGGATGCGCTTACGCTTATCCGGCCTACAAATCTGTGCTTTAACAGTAGGCCGGATAAGGCGTTCA
CGCCGCATCCGGCGGTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSEYRRYYIKGGTWFFTVNLRNRRSHLLTAQFQMLRKVIINVKRARPFEINAWVVLPEHMHCIWTLPESDDDFSSRWREI
KKQFTHACGLQNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVAKGLYPIDWAGDVTDFSAG
ERIIV

Sequences:

>Translated_165_residues
MSEYRRYYIKGGTWFFTVNLRNRRSHLLTAQFQMLRKVIINVKRARPFEINAWVVLPEHMHCIWTLPESDDDFSSRWREI
KKQFTHACGLQNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVAKGLYPIDWAGDVTDFSAG
ERIIV
>Mature_164_residues
SEYRRYYIKGGTWFFTVNLRNRRSHLLTAQFQMLRKVIINVKRARPFEINAWVVLPEHMHCIWTLPESDDDFSSRWREIK
KQFTHACGLQNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVAKGLYPIDWAGDVTDFSAGE
RIIV

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0217 [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=164, Percent_Identity=93.9024390243902, Blast_Score=327, Evalue=3e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19980; Mature: 19849

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYRRYYIKGGTWFFTVNLRNRRSHLLTAQFQMLRKVIINVKRARPFEINAWVVLPEHM
CCCCCEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
HCIWTLPESDDDFSSRWREIKKQFTHACGLQNIWQPRFWEHAIRNTKDYRHHVDYIYINP
EEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHCCCEEEECC
VKHGWVKQVSDWPFSTFHRDVAKGLYPIDWAGDVTDFSAGERIIV
CCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
SEYRRYYIKGGTWFFTVNLRNRRSHLLTAQFQMLRKVIINVKRARPFEINAWVVLPEHM
CCCCEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
HCIWTLPESDDDFSSRWREIKKQFTHACGLQNIWQPRFWEHAIRNTKDYRHHVDYIYINP
EEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCHHHCCCEEEECC
VKHGWVKQVSDWPFSTFHRDVAKGLYPIDWAGDVTDFSAGERIIV
CCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]