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The map label for this gene is ykfJ [H]

Identifier: 218698821

GI number: 218698821

Start: 453581

End: 454732

Strand: Reverse

Name: ykfJ [H]

Synonym: ECIAI39_0416

Alternate gene names: 218698821

Gene position: 454732-453581 (Counterclockwise)

Preceding gene: 218698822

Following gene: 218698820

Centisome position: 8.86

GC content: 52.34

Gene sequence:

>1152_bases
ATGGAATGGTACATGGGCAAATATATTCGTCCCTTATCTGATGCGGTACTTACCATCGCATCTGATGACCTGTGGATCGA
GAGTTCAGCGATCCAACAATTACACACCACGGCAAATTTACCCGACATGCAACGCGTAGTAGGGATGCCAGATTTACACC
CCGGACGCGGCTATCCGATTGGCGCAGCGTTCTTCTCCGTAGGCCGTTTTTACCCGGCACTGGTCGGCAATGATATCGGC
TGCGGTATGGCGCTATGGCAAACAGATATTTTCGCGCGCAAATACAACGCCGATAAGTTTGAAAAGCGATTATCTGCGCT
GGATGACGTTGCTGAAGAAAGCTGGCTGGAGGAAAACCTGCCGTCAGCGTTAGCACAGCATCCGTGGCGCAGCTCGCTGG
GTTCCATCGGTGGCGGAAACCACTTCGCAGAACTGCAACAAGTTGATCAAATTATCGACGCTGAACTGTTTGCACTGACA
GGTCTGGATGCGCAGCATCTGCAACTGCTGGTTCATAGCGGCTCGCGGGGTTTGGGCCAGTCTATTTTACAGCGGCATAT
TGCCTCGTTTTCGCATCATGGTTTGCCTGAAGGCAGTGACGACGCGCTAAGTTATATTGTGGAACATGATGATGCGCTGG
CGTTTGCGCGTATTAATCGCCAGATGATCGCTTTGCGCATAATGCAACAGGTTAAGGCCACCGGAAGTCCTGTTCTGGAT
GTGGCGCATAACTTTGTTAGCGCCTGTCAAATCGGCGATCAACAGGGCTGGTTGCATCGTAAAGGTGCCACGCCGGATGA
CAACGGTCTGGTGATTATTCCCGGTTCACGCGGTGATTACTCCTGGCTGGTTAAACCTGTTGCGAACGAAAAAACGCTCC
ACTCGCTGGCGCATGGGGCAGGGCGTAAATGGGGGCGCACCGAGTGTAAAGGGCGTCTGGCAGCGAAATACACGGCGACG
CAACTCTCGCGTACTGAACTTGGCAGTCGGGTAATTTGTCGCGATAAACAACTCATCTTTGAAGAAGCGCCACAAGCCTA
TAAATCGACTGAAAGCGTCGTGCAATGTCTGGTGCAGGCCGGTTTAATTATTCCTGTCGCGCGGCTGCGTCCGGTGCTAA
CGCTCAAAAACAATGGAGGGAAAAAAGGATGA

Upstream 100 bases:

>100_bases
TGACAAATCCTTTATCAATGACTCTTTGCAGACCTTTCCAGGATTAATTCTTTTTTTCTTGCCCTGGATTCGTCTGCCAT
TTCCTGATTTTTATTCATAA

Downstream 100 bases:

>100_bases
TCTTGCTACAACTCTCCTCAGCTCAGGGGCCGGAAGAATGTTGCCTGGCAGTGAAAAAGGCGCTGGACAGGTTGATTAAA
GAAGCTACCCGACAAGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MEWYMGKYIRPLSDAVLTIASDDLWIESSAIQQLHTTANLPDMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPALVGNDIG
CGMALWQTDIFARKYNADKFEKRLSALDDVAEESWLEENLPSALAQHPWRSSLGSIGGGNHFAELQQVDQIIDAELFALT
GLDAQHLQLLVHSGSRGLGQSILQRHIASFSHHGLPEGSDDALSYIVEHDDALAFARINRQMIALRIMQQVKATGSPVLD
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGAGRKWGRTECKGRLAAKYTAT
QLSRTELGSRVICRDKQLIFEEAPQAYKSTESVVQCLVQAGLIIPVARLRPVLTLKNNGGKKG

Sequences:

>Translated_383_residues
MEWYMGKYIRPLSDAVLTIASDDLWIESSAIQQLHTTANLPDMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPALVGNDIG
CGMALWQTDIFARKYNADKFEKRLSALDDVAEESWLEENLPSALAQHPWRSSLGSIGGGNHFAELQQVDQIIDAELFALT
GLDAQHLQLLVHSGSRGLGQSILQRHIASFSHHGLPEGSDDALSYIVEHDDALAFARINRQMIALRIMQQVKATGSPVLD
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGAGRKWGRTECKGRLAAKYTAT
QLSRTELGSRVICRDKQLIFEEAPQAYKSTESVVQCLVQAGLIIPVARLRPVLTLKNNGGKKG
>Mature_383_residues
MEWYMGKYIRPLSDAVLTIASDDLWIESSAIQQLHTTANLPDMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPALVGNDIG
CGMALWQTDIFARKYNADKFEKRLSALDDVAEESWLEENLPSALAQHPWRSSLGSIGGGNHFAELQQVDQIIDAELFALT
GLDAQHLQLLVHSGSRGLGQSILQRHIASFSHHGLPEGSDDALSYIVEHDDALAFARINRQMIALRIMQQVKATGSPVLD
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGAGRKWGRTECKGRLAAKYTAT
QLSRTELGSRVICRDKQLIFEEAPQAYKSTESVVQCLVQAGLIIPVARLRPVLTLKNNGGKKG

Specific function: Unknown

COG id: COG1690

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7657015, Length=446, Percent_Identity=25.7847533632287, Blast_Score=100, Evalue=4e-21,
Organism=Escherichia coli, GI2367224, Length=411, Percent_Identity=27.7372262773723, Blast_Score=124, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17506665, Length=442, Percent_Identity=26.2443438914027, Blast_Score=113, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001233 [H]

Pfam domain/function: PF01139 UPF0027 [H]

EC number: NA

Molecular weight: Translated: 42035; Mature: 42035

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWYMGKYIRPLSDAVLTIASDDLWIESSAIQQLHTTANLPDMQRVVGMPDLHPGRGYPI
CCCCHHHHHHHHHHHEEEEECCCCEECHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCH
GAAFFSVGRFYPALVGNDIGCGMALWQTDIFARKYNADKFEKRLSALDDVAEESWLEENL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
PSALAQHPWRSSLGSIGGGNHFAELQQVDQIIDAELFALTGLDAQHLQLLVHSGSRGLGQ
HHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH
SILQRHIASFSHHGLPEGSDDALSYIVEHDDALAFARINRQMIALRIMQQVKATGSPVLD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGA
HHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHC
GRKWGRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSTESVVQCLVQA
CCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCHHHHHHHHHHHHHHHHC
GLIIPVARLRPVLTLKNNGGKKG
CHHHHHHHHCEEEEEECCCCCCC
>Mature Secondary Structure
MEWYMGKYIRPLSDAVLTIASDDLWIESSAIQQLHTTANLPDMQRVVGMPDLHPGRGYPI
CCCCHHHHHHHHHHHEEEEECCCCEECHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCH
GAAFFSVGRFYPALVGNDIGCGMALWQTDIFARKYNADKFEKRLSALDDVAEESWLEENL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
PSALAQHPWRSSLGSIGGGNHFAELQQVDQIIDAELFALTGLDAQHLQLLVHSGSRGLGQ
HHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH
SILQRHIASFSHHGLPEGSDDALSYIVEHDDALAFARINRQMIALRIMQQVKATGSPVLD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGA
HHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHC
GRKWGRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSTESVVQCLVQA
CCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCHHHHHHHHHHHHHHHHC
GLIIPVARLRPVLTLKNNGGKKG
CHHHHHHHHCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]