Definition Escherichia coli IAI39 chromosome, complete genome.
Accession NC_011750
Length 5,132,068

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The map label for this gene is yahD

Identifier: 218698778

GI number: 218698778

Start: 401783

End: 402388

Strand: Reverse

Name: yahD

Synonym: ECIAI39_0368

Alternate gene names: 218698778

Gene position: 402388-401783 (Counterclockwise)

Preceding gene: 218698781

Following gene: 218698777

Centisome position: 7.84

GC content: 46.04

Gene sequence:

>606_bases
ATGACTATAAAAAATCTACCTGCCGACTATTTATTGGCTGCGCAACAGGGTGATATCGATAAAGTAAAAACATGCCTTGC
GCTGGGTGTCGATATTAATACCTGCGATCGTCAGGGGAAAACGGCAATTACGCTGGCAAGTTTATATCAGCAATATGCTT
GCGTTCAGGCATTAATTGATGCCGGAGCAGATATTAATAAGCAAGATCAAATATGTTCAAATCCTTTTTTAATTAGCTGC
CTGACCGGCGATTTAACCCTGTTACGGATTATTTTACCGGCTAAACCCGATCTTAATTGCGTCACCCGTTTTGGCGGTGT
CGGCCTGACGCCTGCCTGTGAAAAAGGCCATTTAAGTATTGTAAAAGAGCTTTTGGCGCATACGGAGATTAACGTTAACC
AGACCAACCATGTTGGCTGGACGCCGCTACTGGAAGCAATTGTGCTTAATGATGGCGGGATTAAACAGCAGGCGATTGTC
CAGTTATTGCTGGAACACGGTGCCAGCCCGCACATGACGGATAAATATGGCAAAACGCCGCTGGAACTGGCGCGGGAACG
AGGCTTTGAAGAGATTGCACAGTTACTGATTGCCGCAGGTGCATAA

Upstream 100 bases:

>100_bases
GGCGAAATACGGCGAATTAAATTTAAGCGGGTTCTTTTATCAGATTATCGTTGCTATTCTCAATTCATCGAAAACAGCCA
CAAAAACCAGGGGAATGTGA

Downstream 100 bases:

>100_bases
ACCGGGAGGCTTGCTATCAACACACCAGAAAGACGGTGTGTGTGGGCGCTAACTGCGGATGCTGATTTTCTGGCGCAGCG
GGGGCAAGGACAGGTTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDQICSNPFLISC
LTGDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIV
QLLLEHGASPHMTDKYGKTPLELARERGFEEIAQLLIAAGA

Sequences:

>Translated_201_residues
MTIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDQICSNPFLISC
LTGDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIV
QLLLEHGASPHMTDKYGKTPLELARERGFEEIAQLLIAAGA
>Mature_200_residues
TIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDQICSNPFLISCL
TGDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQ
LLLEHGASPHMTDKYGKTPLELARERGFEEIAQLLIAAGA

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI268607595, Length=190, Percent_Identity=28.4210526315789, Blast_Score=88, Evalue=5e-18,
Organism=Homo sapiens, GI62988328, Length=190, Percent_Identity=28.4210526315789, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI10863929, Length=194, Percent_Identity=29.8969072164948, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI68131557, Length=189, Percent_Identity=30.6878306878307, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI304361760, Length=180, Percent_Identity=30.5555555555556, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI304361757, Length=180, Percent_Identity=30.5555555555556, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI24233530, Length=188, Percent_Identity=28.7234042553192, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI38683816, Length=192, Percent_Identity=31.7708333333333, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI38683807, Length=192, Percent_Identity=31.7708333333333, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI157743284, Length=189, Percent_Identity=26.984126984127, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI55741641, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI46519154, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI46519147, Length=193, Percent_Identity=32.1243523316062, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI46519151, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI37620163, Length=193, Percent_Identity=32.1243523316062, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI39812133, Length=174, Percent_Identity=29.3103448275862, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI70780355, Length=253, Percent_Identity=25.296442687747, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI70780357, Length=253, Percent_Identity=25.296442687747, Blast_Score=71, Evalue=5e-13,
Organism=Homo sapiens, GI70780359, Length=253, Percent_Identity=25.296442687747, Blast_Score=71, Evalue=5e-13,
Organism=Homo sapiens, GI215598574, Length=253, Percent_Identity=25.296442687747, Blast_Score=71, Evalue=5e-13,
Organism=Homo sapiens, GI70780353, Length=253, Percent_Identity=25.296442687747, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI255982572, Length=194, Percent_Identity=28.8659793814433, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI7705831, Length=194, Percent_Identity=28.8659793814433, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI52426735, Length=230, Percent_Identity=27.8260869565217, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI52426737, Length=158, Percent_Identity=31.0126582278481, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI188595682, Length=158, Percent_Identity=31.0126582278481, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI30425444, Length=186, Percent_Identity=30.1075268817204, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI116875852, Length=190, Percent_Identity=30.5263157894737, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI89363047, Length=190, Percent_Identity=26.8421052631579, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI70995267, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI148596917, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI32967601, Length=188, Percent_Identity=26.5957446808511, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI34304381, Length=194, Percent_Identity=27.319587628866, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI34304379, Length=194, Percent_Identity=27.319587628866, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI38327522, Length=174, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI224809476, Length=193, Percent_Identity=30.5699481865285, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI224809474, Length=193, Percent_Identity=30.5699481865285, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI224809478, Length=193, Percent_Identity=30.5699481865285, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI224809472, Length=193, Percent_Identity=30.5699481865285, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI224809470, Length=193, Percent_Identity=30.5699481865285, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI224809468, Length=193, Percent_Identity=30.5699481865285, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI310120310, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI118150656, Length=175, Percent_Identity=31.4285714285714, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI7705748, Length=189, Percent_Identity=28.042328042328, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI163914396, Length=189, Percent_Identity=28.042328042328, Blast_Score=64, Evalue=7e-11,
Organism=Escherichia coli, GI1786511, Length=201, Percent_Identity=96.5174129353234, Blast_Score=394, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI71981411, Length=220, Percent_Identity=28.6363636363636, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71981414, Length=222, Percent_Identity=28.8288288288288, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25145251, Length=222, Percent_Identity=28.8288288288288, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71981389, Length=222, Percent_Identity=28.8288288288288, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17542700, Length=222, Percent_Identity=28.8288288288288, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI212646035, Length=172, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI212646031, Length=172, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI212646033, Length=172, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45551135, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221330480, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221330482, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221330476, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI45550479, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28573593, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221330474, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581260, Length=201, Percent_Identity=30.8457711442786, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24581258, Length=201, Percent_Identity=30.8457711442786, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221330478, Length=191, Percent_Identity=30.8900523560209, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281363919, Length=191, Percent_Identity=30.8900523560209, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI281359521, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI281359519, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28558752, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28558750, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28558756, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28558754, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI161082110, Length=190, Percent_Identity=28.9473684210526, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI161082106, Length=190, Percent_Identity=28.9473684210526, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI161082081, Length=190, Percent_Identity=28.9473684210526, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI161082096, Length=190, Percent_Identity=28.9473684210526, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28571867, Length=192, Percent_Identity=30.7291666666667, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28571865, Length=192, Percent_Identity=30.7291666666667, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161082085, Length=190, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161082099, Length=190, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161082092, Length=218, Percent_Identity=27.0642201834862, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161082089, Length=218, Percent_Identity=27.0642201834862, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24650843, Length=225, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281366282, Length=196, Percent_Identity=27.5510204081633, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI161084156, Length=196, Percent_Identity=27.5510204081633, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI281366284, Length=196, Percent_Identity=27.5510204081633, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI161084152, Length=196, Percent_Identity=27.5510204081633, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI281366286, Length=196, Percent_Identity=27.5510204081633, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 21625; Mature: 21494

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALID
CCCCCCCHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AGADINKQDQICSNPFLISCLTGDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSI
CCCCCCCCHHHHCCCEEEEEHHCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHH
VKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHMTDKYGKTP
HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH
LELARERGFEEIAQLLIAAGA
HHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALID
CCCCCCHHHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AGADINKQDQICSNPFLISCLTGDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSI
CCCCCCCCHHHHCCCEEEEEHHCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHH
VKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHMTDKYGKTP
HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH
LELARERGFEEIAQLLIAAGA
HHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]