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The map label for this gene is yahJ

Identifier: 218698773

GI number: 218698773

Start: 395488

End: 396870

Strand: Reverse

Name: yahJ

Synonym: ECIAI39_0363

Alternate gene names: 218698773

Gene position: 396870-395488 (Counterclockwise)

Preceding gene: 218698774

Following gene: 218698772

Centisome position: 7.73

GC content: 56.54

Gene sequence:

>1383_bases
ATGAAAGAAAACAATAGCCGCCGTGAATTTCTGAGCCAGAGCGGTAAGATGGTTACCGCCGCCGCGCTGTTTGGTACCTC
AGTGCCGCTCGCCCATGCGGGGGTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATT
ACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTACAGACCCGCACGGCGCGCCAG
ACCGTGGAGATTCAGGACGGTAAAATTGTTGCCCTGCGCGAGAACAAGCAGCATCCGGACGCCACGCTACCGCACTATGA
CGCTGGCGGTAAGCTGATGCTGCCCACCACCCGCGACATGCATATTCATCTCGACAAAACCTTCTACGGCGGGCCGTGGC
GCTCGCTCAATCGTCCGGCAGGCACCACTATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCG
TACACGCAGGAACGGGCGGAAAAACTGATCGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCATTGCAATAT
CGAACCGGTTTCCGGCCTGAAAAATCTGCAAAATTTGCAGGCGGTGCTGGCGCGACGTCAGGCGGGCTTCGAGTGTGAAA
TTGTCGCCTTCCCGCAGCACGGTTTGCTGCTGTCGAAATCGGAACCCTTAATGCGCGAAGCGATGCAGGCGGGGGCGCAT
TACGTCGGCGGGCTGGACCCGACCAGTGTTGATGGCGCGATGGAAAAATCCCTCGACACCATGTTCCAGATTGCCCTTGA
CTACGACAAAGGCGTCGATATTCACCTGCACGAAACCACTCCGTCGGGCGTGGCAGCCATCAATTATATGGTTGAAACGG
TAGAGAAAACGCCACAGCTGAAGGGCAAGCTGACCATCAGTCACGCCTTTGCGTTGGCAACGCTCAACGAACAACAGGTA
GATGAACTGGCGCACCGGATGGCGGCGCAGCAAATTTCTATCGCCTCGACGGTGCCGATTGGCACGCTGCATATGCCGCT
CAAACAGTTGCACGACAAAGGCGTAAAAGTCATGACCGGCACCGACAGCGTTATCGACCACTGGTCTCCCTACGGCCTGG
GCGACATGCTGGAAAAAGCCAATCTCTACGCGCAGCTCTATATTCGTCCTAACGAACAGAATTTGTCCCGTTCGCTGTTT
TTAGCCACTGGCGATGTATTGCCGCTCAACGAAAAAGGCGAGCGCGTGTGGCCCAAAGCGCAGGATGACGCCAGCTTTGT
GCTGGTGGACGCCTCCTGTTCCGCCGAGGCGGTGGCGCGTATCTCGCCGAGAACCGCAACGTTCCATAAAGGGCAACTGG
TGTGGGGGAGTGTGGCAGGTTGA

Upstream 100 bases:

>100_bases
GCAGGGCGGTAAAGAAGTGATTATCACCACGCCGGAATGCCTGCCTGCGGCGCTACGCGGCGAAACGGGCACCCATATTA
TTAAAACCTAAGGACGTAAG

Downstream 100 bases:

>100_bases
TACGAACTTGATATATCTGCAACGGTGAACAGTAAGAGATTTAAGCCCCAGGGAGTGGGGCGGCAATGGTTTGCTAATGA
ATCATCCTGAACTTTATAAT

Product: putative deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAGVAGTLNCEANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQ
TVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQP
YTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQV
DELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLF
LATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG

Sequences:

>Translated_460_residues
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAGVAGTLNCEANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQ
TVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQP
YTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQV
DELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLF
LATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
>Mature_460_residues
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAGVAGTLNCEANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQ
TVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQP
YTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQV
DELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLF
LATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786517, Length=460, Percent_Identity=98.4782608695652, Blast_Score=946, Evalue=0.0,
Organism=Escherichia coli, GI1786531, Length=323, Percent_Identity=26.0061919504644, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50560; Mature: 50560

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAGVAGTLNCEANNTMKITDPHYYLDNVL
CCCCCHHHHHHHCCCCEEEEEEHHCCCCCHHHCCCCEEEEECCCCEEEEECCHHHHHHHH
LETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDM
HHCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCE
HIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTI
EEEEECEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEE
ARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCHHHHHHHHCCCC
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAAINYMVETVEKTPQL
EECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
KGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTG
CCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEC
TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKA
CCHHHHCCCCCCHHHHHHHCCEEEEEEEECCHHCCCEEEEEEECCEEECCCCCCCCCCCC
QDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
CCCCCEEEEECCCCCHHHHHCCCCCEEEECCEEEEEECCC
>Mature Secondary Structure
MKENNSRREFLSQSGKMVTAAALFGTSVPLAHAGVAGTLNCEANNTMKITDPHYYLDNVL
CCCCCHHHHHHHCCCCEEEEEEHHCCCCCHHHCCCCEEEEECCCCEEEEECCHHHHHHHH
LETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDM
HHCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCE
HIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTI
EEEEECEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEE
ARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCHHHHHHHHCCCC
YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAAINYMVETVEKTPQL
EECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
KGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTG
CCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEC
TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKA
CCHHHHCCCCCCHHHHHHHCCEEEEEEEECCHHCCCEEEEEEECCEEECCCCCCCCCCCC
QDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
CCCCCEEEEECCCCCHHHHHCCCCCEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]