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The map label for this gene is yadN

Identifier: 218698562

GI number: 218698562

Start: 167783

End: 168367

Strand: Reverse

Name: yadN

Synonym: ECIAI39_0145

Alternate gene names: 218698562

Gene position: 168367-167783 (Counterclockwise)

Preceding gene: 218698563

Following gene: 218698561

Centisome position: 3.28

GC content: 45.13

Gene sequence:

>585_bases
ATGTCTAAAAAATTAGGTTTTGCGCTGTCTGGTCTTATGCTGGCAATGGTTGCAGGTACTGCTTCTGCTGGTCTGGACGG
TGGTCAGTTAAATATCAGCGGTCTGGTTGTTGATAATACCTGTGAAACTCGCGTAGACGGTGGCAACAAAGATGGTCTGG
TGCTTCTGCAAACTGCAACTGTTGCTGAAATCAGTGCTGGCGTGTTGAATGACACCGTAGGTGCTAAAGCTAAACCTTTC
AGCATCACCGTTGACTGCAGCAATGCAAACCCGAATCCTGGTAGCACCGCAAAAATGACCTTCGGTTCCGTGTTCTTTGG
CAACAGCAAAGGGACTCTGAACAACGATATGTCTATTAACACGCCTTCTGACGGCGTAAATATTGCCCTGCACAATATTG
ATGGTTCCACTATCAAACAGGTTCAAATTAACAACCCTGGCGATGTGTATACTAAAGCCCTGGATGCAACGACAAAATCT
GCTGTGTATGATTTTAAAGCGTCTTACGTTCGTGCCGTCGCAGACCAAACAGCAACTGCTGGTTATGTAAAAACTAACAC
TGCATACACCATTACTTATCAGTAA

Upstream 100 bases:

>100_bases
TTGCTCATTAATATCTAACATTTGTTTCTCCTATTTGTGTCATGAATAGTTACTCTTCAAATATGTAGTCTGACTAATGG
AATTTTATTCAAGGATTTTT

Downstream 100 bases:

>100_bases
GTATTCACCAATTAAATTGATTGAATGAATATACAGGGAATAGTATTAATAATTTCTATTTTTATATTATTCCCTGTTTT
AATTAACTCTGTCAGGGATG

Product: putative fimbrial-like adhesin exported protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSKKLGFALSGLMLAMVAGTASAGLDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTATVAEISAGVLNDTVGAKAKPF
SITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINTPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKS
AVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ

Sequences:

>Translated_194_residues
MSKKLGFALSGLMLAMVAGTASAGLDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTATVAEISAGVLNDTVGAKAKPF
SITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINTPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKS
AVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ
>Mature_193_residues
SKKLGFALSGLMLAMVAGTASAGLDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTATVAEISAGVLNDTVGAKAKPFS
ITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINTPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKSA
VYDFKASYVRAVADQTATAGYVKTNTAYTITYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786334, Length=194, Percent_Identity=96.3917525773196, Blast_Score=375, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19987; Mature: 19855

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLGFALSGLMLAMVAGTASAGLDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTAT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECC
VAEISAGVLNDTVGAKAKPFSITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSIN
HHHHHCCHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEE
TPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKSAVYDFKASYVRAVADQTATA
CCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
GYVKTNTAYTITYQ
CEEECCEEEEEEEC
>Mature Secondary Structure 
SKKLGFALSGLMLAMVAGTASAGLDGGQLNISGLVVDNTCETRVDGGNKDGLVLLQTAT
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECC
VAEISAGVLNDTVGAKAKPFSITVDCSNANPNPGSTAKMTFGSVFFGNSKGTLNNDMSIN
HHHHHCCHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEE
TPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKSAVYDFKASYVRAVADQTATA
CCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
GYVKTNTAYTITYQ
CEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]